RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 NBL1P41271 181 aa25.16■■□□□ 1.62
MSX1-201ENST00000382723 SESN3P58005 492 aa25.16■■□□□ 1.62
MSX1-201ENST00000382723 CEACAM20Q6UY09 585 aa25.16■■□□□ 1.62
MSX1-201ENST00000382723 HORMAD2Q8N7B1 307 aa25.16■■□□□ 1.62
MSX1-201ENST00000382723 OR7G2Q8NG99 324 aa25.16■■□□□ 1.62
MSX1-201ENST00000382723 SFXN5Q8TD22 340 aa25.16■■□□□ 1.62
MSX1-201ENST00000382723 CLIP3Q96DZ5 547 aa25.16■■□□□ 1.62
MSX1-201ENST00000382723 SLC35G5Q96KT7 338 aa25.16■■□□□ 1.62
MSX1-201ENST00000382723 CDC6Q99741 560 aa25.16■■□□□ 1.62
MSX1-201ENST00000382723 GORASP2Q9H8Y8 452 aa25.16■■□□□ 1.62
MSX1-201ENST00000382723 BLACEA4D250 179 aa25.15■■□□□ 1.62
MSX1-201ENST00000382723 TGFBR3LH3BV60 316 aa25.15■■□□□ 1.62
MSX1-201ENST00000382723 CREG1O75629 220 aa25.15■■□□□ 1.62
MSX1-201ENST00000382723 ATP1B1P05026 303 aa25.15■■□□□ 1.62
MSX1-201ENST00000382723 ANPEPP15144 967 aa25.15■■□□□ 1.62
MSX1-201ENST00000382723 PRR5P85299 388 aa25.15■■□□□ 1.62
MSX1-201ENST00000382723 RHBDD2Q6NTF9 364 aa25.15■■□□□ 1.62
MSX1-201ENST00000382723 SLC38A9Q8NBW4 561 aa25.15■■□□□ 1.62
MSX1-201ENST00000382723 NUP43Q8NFH3 380 aa25.15■■□□□ 1.62
MSX1-201ENST00000382723 ASCC3Q8N3C0 2202 aaKnown RBP25.15■■□□□ 1.62
MSX1-201ENST00000382723 TCRBV5S2A0A599 114 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 OR10H2O60403 315 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 DSTNP60981 165 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 MFSD4BQ5TF39 518 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 ZFP1Q6P2D0 407 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 BHLHB9Q6PI77 547 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 OR56A1Q8NGH5 318 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 CANT1Q8WVQ1 401 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 MOAP1Q96BY2 351 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 YIPF4Q9BSR8 244 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 EQTNQ9NQ60 294 aa25.14■■□□□ 1.62
MSX1-201ENST00000382723 DDX18Q9NVP1 670 aaKnown RBP25.14■■□□□ 1.62
MSX1-201ENST00000382723 STX18Q9P2W9 335 aaKnown RBP25.14■■□□□ 1.62
MSX1-201ENST00000382723 CCL4P13236 92 aa25.14■■□□□ 1.61
MSX1-201ENST00000382723 FAM111BQ6SJ93 734 aa25.14■■□□□ 1.61
MSX1-201ENST00000382723 ZC3H7AQ8IWR0 971 aaKnown RBP25.14■■□□□ 1.61
MSX1-201ENST00000382723 C11orf65Q8NCR3 313 aa25.14■■□□□ 1.61
MSX1-201ENST00000382723 RAB8BQ92930 207 aa25.14■■□□□ 1.61
MSX1-201ENST00000382723 OTUB1Q96FW1 271 aaPredicted RBP25.14■■□□□ 1.61
MSX1-201ENST00000382723 ALOXE3Q9BYJ1 711 aa25.14■■□□□ 1.61
MSX1-201ENST00000382723 SERHL2Q9H4I8 314 aa25.14■■□□□ 1.61
MSX1-201ENST00000382723 AURKCQ9UQB9 309 aa25.14■■□□□ 1.61
MSX1-201ENST00000382723 SCN2AQ99250 2005 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 DHRS12A0PJE2 317 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 UPK1AO00322 258 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 NME6O75414 186 aaPredicted RBP25.13■■□□□ 1.61
MSX1-201ENST00000382723 RFPL3O75679 317 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 HMGN2P05204 90 aaKnown RBP25.13■■□□□ 1.61
MSX1-201ENST00000382723 SLC35E2P0CK97 266 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 CLDN6P56747 220 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 MAP7Q14244 749 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 LASP1Q14847 261 aaKnown RBP25.13■■□□□ 1.61
MSX1-201ENST00000382723 TRMT12Q53H54 448 aaKnown RBP25.13■■□□□ 1.61
MSX1-201ENST00000382723 ZNF628Q5EBL2 1059 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 GALNT10Q86SR1 603 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 SIMC1Q8NDZ2 872 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 FAM110BQ8TC76 370 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 SLCO4A1Q96BD0 722 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 IRF2BPLQ9H1B7 796 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 LANCL2Q9NS86 450 aa25.13■■□□□ 1.61
MSX1-201ENST00000382723 POLR1CO15160 346 aaPredicted RBP25.12■■□□□ 1.61
MSX1-201ENST00000382723 MATN1P21941 496 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 HSD17B7P56937 341 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 MINDY4Q4G0A6 757 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 LRRC23Q53EV4 343 aaPredicted RBP25.12■■□□□ 1.61
MSX1-201ENST00000382723 BMPERQ8N8U9 685 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 OR5D16Q8NGK9 328 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 NFKBIDQ8NI38 313 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 FBXO30Q8TB52 745 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 C16orf58Q96GQ5 468 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 RASSF4Q9H2L5 321 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 OR51I1Q9H343 314 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 AP4S1Q9Y587 144 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 PSMA4P25789 261 aaKnown RBP25.12■■□□□ 1.61
MSX1-201ENST00000382723 AQP1P29972 269 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 PCGF2P35227 344 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 IL11RAQ14626 422 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 VWA2Q5GFL6 755 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 DGAT2L6Q6ZPD8 337 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 OR1F2PQ96R84 312 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 TMEM38AQ9H6F2 299 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 NECTIN3Q9NQS3 549 aa25.12■■□□□ 1.61
MSX1-201ENST00000382723 PLOD2O00469 737 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 HMGN4O00479 90 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 BMP10O95393 424 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 SERPINA1P01009 418 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 OR12D1P0DN82 309 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 FGF5P12034 268 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 SLC7A1P30825 629 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 SOX18P35713 384 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 INSM1Q01101 510 aaPredicted RBP25.11■■□□□ 1.61
MSX1-201ENST00000382723 SLC34A1Q06495 639 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 SCARB2Q14108 478 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 VEZF1Q14119 521 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 PRICKLE4Q2TBC4 344 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 RNF111Q6ZNA4 994 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 PRSS58Q8IYP2 241 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 ADGRG5Q8IZF4 528 aa25.11■■□□□ 1.61
MSX1-201ENST00000382723 RBM18Q96H35 190 aaKnown RBP25.11■■□□□ 1.61
MSX1-201ENST00000382723 SEPHS2Q99611 448 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms