RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 DCTP40126 519 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 HTR3AP46098 478 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 UQCRFS1P47985 274 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 NPY4RP50391 375 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 RABGGTBP53611 331 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 WNT3AP56704 352 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 MLF1P58340 268 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 SPIBQ01892 262 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 BCL7AQ4VC05 210 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 NOTUMQ6P988 496 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 FIP1L1Q6UN15 594 aaKnown RBP5.48□□□□□ -1.53
RFC1-202ENST00000381897 PYROXD2Q8N2H3 581 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 GALNT11Q8NCW6 608 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 TMIEQ8NEW7 156 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 COQ8AQ8NI60 647 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 ATOH1Q92858 354 aaPredicted RBP5.48□□□□□ -1.53
RFC1-202ENST00000381897 KCTD12Q96CX2 325 aaKnown RBP5.48□□□□□ -1.53
RFC1-202ENST00000381897 RNFT2Q96EX2 444 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 TMEM41AQ96HV5 264 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 SNX22Q96L94 193 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 PRMT6Q96LA8 375 aaPredicted RBP5.48□□□□□ -1.53
RFC1-202ENST00000381897 TSGA13Q96PP4 275 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 INSM2Q96T92 566 aaPredicted RBP5.48□□□□□ -1.53
RFC1-202ENST00000381897 MYOCQ99972 504 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 MAPKAP1Q9BPZ7 522 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 GLIS2Q9BZE0 524 aaPredicted RBP5.48□□□□□ -1.53
RFC1-202ENST00000381897 TKTL2Q9H0I9 626 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 XYLT2Q9H1B5 865 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 GHITMQ9H3K2 345 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 GSTO2Q9H4Y5 243 aa5.48□□□□□ -1.53
RFC1-202ENST00000381897 K7EQM0 130 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 MATN3O15232 486 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 LILRB5O75023 590 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 PRPS2P11908 318 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 NDUFS1P28331 727 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 SMIM11AP58511 58 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 KCNJ10P78508 379 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 GALEQ14376 348 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 COL28A1Q2UY09 1125 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 C10orf120Q5SQS8 335 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 LYPLAL1Q5VWZ2 237 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 ZNF782Q6ZMW2 699 aaPredicted RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 MAMDC2Q7Z304 686 aaPredicted RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 SLC34A3Q8N130 599 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 BHLHE23Q8NDY6 225 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 GPBAR1Q8TDU6 330 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 SLC7A6Q92536 515 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 C18orf25Q96B23 403 aaPredicted RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 ATG4CQ96DT6 458 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 KCTD7Q96MP8 289 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 ZNF300Q96RE9 604 aaPredicted RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 ZNF607Q96SK3 696 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 GMLQ99445 158 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 IL12RB2Q99665 862 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 DUSP16Q9BY84 665 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 TMEM39BQ9GZU3 492 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 ERVK13-1Q9NX77 482 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 MAT2BQ9NZL9 334 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 NDUFAF4Q9P032 175 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 HMGXB4Q9UGU5 601 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 RNF24Q9Y225 148 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 ASB4Q9Y574 426 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 TIMM22Q9Y584 194 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 CDH10Q9Y6N8 788 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 MMP20O60882 483 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 TGM6O95932 706 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 PNMTP11086 282 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 ANXA3P12429 323 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 LHX1P48742 406 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 TTPAP49638 278 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 PCBP3P57721 371 aaKnown RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 JAG1P78504 1218 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 S100A12P80511 92 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 TLE1Q04724 770 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 LRRC32Q14392 662 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 GRB7Q14451 532 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 TEAD4Q15561 434 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 ZRANB3Q5FWF4 1079 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 PIGZQ86VD9 579 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 C12orf29Q8N999 325 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 ACOT4Q8N9L9 421 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 FAM98AQ8NCA5 519 aaKnown RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 FAM83FQ8NEG4 500 aaPredicted RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 OR4L1Q8NH43 312 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 VANGL1Q8TAA9 524 aaPredicted RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 FANK1Q8TC84 345 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 ZSWIM3Q96MP5 696 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 FOXN4Q96NZ1 517 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 EDEM2Q9BV94 578 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 SLC25A51Q9H1U9 297 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 LRTM1Q9HBL6 345 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 NUFIP1Q9UHK0 495 aaKnown RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 MBD1Q9UIS9 605 aaPredicted RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 RPL36Q9Y3U8 105 aaKnown RBP5.47□□□□□ -1.53
RFC1-202ENST00000381897 KLK4Q9Y5K2 254 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 DNAJC15Q9Y5T4 150 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 TCRBV5S2A0A599 114 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 OR2A25A4D2G3 310 aa5.47□□□□□ -1.53
RFC1-202ENST00000381897 CLCA1A8K7I4 914 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms