RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 HIST1H2AGP0C0S8 130 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 OR56A5P0C7T3 313 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PF4V1P10720 104 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PRPS2P11908 318 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SRCP12931 536 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 AMD1P17707 334 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 HIST1H2ADP20671 130 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 LHCGRP22888 699 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 IGFBP5P24593 272 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 GABRR2P28476 465 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 EPHA2P29317 976 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SERPINA4P29622 427 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TGFBR1P36897 503 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 OPRL1P41146 370 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 NSG1P42857 185 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CASP9P55211 416 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 GABARAPL2P60520 117 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PHEXP78562 749 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 EMX1Q04741 257 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 EPS8Q12929 822 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ABRQ12979 859 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CHIT1Q13231 466 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 DDX39BQ13838 428 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 GALEQ14376 348 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 GBX1Q14549 363 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 NPTX1Q15818 432 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 DUOXA1Q1HG43 343 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PTCHD3Q3KNS1 767 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 GPR33Q49SQ1 333 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 LRIF1Q5T3J3 769 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TMEM236Q5W0B7 351 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 NOXRED1Q6NXP6 359 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SHQ1Q6PI26 577 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 SYCE2Q6PIF2 218 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 USP45Q70EL2 814 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TMPRSS9Q7Z410 1059 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 VTCN1Q7Z7D3 282 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 IGFN1Q86VF2 1251 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 HIPK1Q86Z02 1210 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 GALNT13Q8IUC8 556 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SNX29P2Q8IUI4 249 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CLECL1Q8IZS7 167 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PRR18Q8N4B5 295 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TMCO5AQ8N6Q1 288 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 TOR1AIP2Q8NFQ8 470 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 NDNFQ8TB73 568 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MCOLN3Q8TDD5 553 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 FAR1Q8WVX9 515 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 VOPP1Q96AW1 172 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 RGMAQ96B86 450 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ERLEC1Q96DZ1 483 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CMTM7Q96FZ5 175 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 REXO5Q96IC2 774 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 TPD52L3Q96J77 140 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CEP295NLQ96MC4 621 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 RDH12Q96NR8 316 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PANX1Q96RD7 426 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 COPS8Q99627 209 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 H2AFJQ9BTM1 129 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SLC29A3Q9BZD2 475 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ZDHHC6Q9H6R6 413 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MAGIXQ9H6Y5 334 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 RMND5AQ9H871 391 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 GPN2Q9H9Y4 310 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 ABCB8Q9NUT2 735 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 C3orf18Q9UK00 162 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PNMA8BQ9ULN7 279 aaPredicted RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 SNX6Q9UNH7 406 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ERVK-11Q9UQG0 969 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MAN2B2Q9Y2E5 1009 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ZNF510Q9Y2H8 683 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 GMPPBQ9Y5P6 360 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 INSL5Q9Y5Q6 135 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 DOCK6Q96HP0 2047 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 DENND4CQ5VZ89 1909 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MICAL3Q7RTP6 2002 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 HELZP42694 1942 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 FUOMA2VDF0 154 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 PABPN1LA6NDY0 278 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 ZNF785A8K8V0 405 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 AGAP14A8MT82 685 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 EVPLLA8MZ36 301 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 E9PLN8 166 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MASP2O00187 686 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MGST3O14880 152 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SOCS5O75159 536 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 UGT2B11O75310 529 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 SULT1C4O75897 302 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CCNDBP1O95273 360 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 KCNK5O95279 499 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 LATS1O95835 1130 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 FADS2O95864 444 aaKnown RBP3.54□□□□□ -1.84
SMC6-202ENST00000381272 VIPP01282 170 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 MT-ND2P03891 347 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 FABP3P05413 133 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 POU2F2P09086 479 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 CBSLP0DN79 551 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 LAMP1P11279 417 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 COX7A2P14406 83 aa3.54□□□□□ -1.84
SMC6-202ENST00000381272 ATP1B2P14415 290 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms