RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 EMC4Q5J8M3 183 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 LGSNQ5TDP6 509 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 HLA-DQA1Q5Y7H0 255 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 TTC19Q6DKK2 380 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-202ENST00000381208 CLYBLQ8N0X4 340 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 PTGR2Q8N8N7 351 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-202ENST00000381208 ZNF592Q92610 1267 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 GAL3ST4Q96RP7 486 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 SECISBP2Q96T21 854 aaKnown RBP11.97□□□□□ -0.49
RPAIN-202ENST00000381208 FMO2Q99518 471 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 MRPL57Q9BQC6 102 aaKnown RBP11.97□□□□□ -0.49
RPAIN-202ENST00000381208 EXO5Q9H790 373 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 NMRK1Q9NWW6 199 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 TUBA8Q9NY65 449 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-202ENST00000381208 NINJ2Q9NZG7 142 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 ZNF180Q9UJW8 692 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 RNF11Q9Y3C5 154 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 HRH3Q9Y5N1 445 aa11.97□□□□□ -0.49
RPAIN-202ENST00000381208 INTS1Q8N201 2190 aaKnown RBP11.97□□□□□ -0.49
RPAIN-202ENST00000381208 ATP6AP2A0A1C7CYW4 349 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 G3V3Y1 287 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 TMPRSS11DO60235 418 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 ZNF354AO60765 605 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-202ENST00000381208 EEDO75530 441 aaKnown RBP11.96□□□□□ -0.49
RPAIN-202ENST00000381208 ATP6AP2O75787 350 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 SIX3O95343 332 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-202ENST00000381208 AIFM1O95831 613 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 PEX19P40855 299 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 ZFP36L2P47974 494 aaKnown RBP11.96□□□□□ -0.49
RPAIN-202ENST00000381208 NRG3P56975 720 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 NUP107P57740 925 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 TLE4Q04727 773 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 SF3B4Q15427 424 aaKnown RBP eCLIP11.96□□□□□ -0.495e-17■■■■■ 28.1
RPAIN-202ENST00000381208 GLE1Q53GS7 698 aaKnown RBP11.96□□□□□ -0.49
RPAIN-202ENST00000381208 TMEM198Q66K66 360 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 ZNF585AQ6P3V2 769 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 LYPD8Q6UX82 237 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 GALNT12Q8IXK2 581 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 LRRC25Q8N386 305 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-202ENST00000381208 RNF175Q8N4F7 328 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 MMGT1Q8N4V1 131 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 C17orf47Q8NEP4 570 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 OR7G1Q8NGA0 311 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 OR4K14Q8NGD5 310 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 TRPC4APQ8TEL6 797 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 PHF21BQ96EK2 531 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 TTYH2Q9BSA4 534 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 ELOVL6Q9H5J4 265 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 CXorf21Q9HAI6 301 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 PNPLA3Q9NST1 481 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 PSME2Q9UL46 239 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 CFL2Q9Y281 166 aa11.96□□□□□ -0.49
RPAIN-202ENST00000381208 C2orf92A0A1B0GVN3 265 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 URI1O94763 535 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-202ENST00000381208 TOXO94900 526 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 SNX4O95219 450 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 OTCP00480 354 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 MSX1P28360 303 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 PIGAP37287 484 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 NEK2P51955 445 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 FUT7Q11130 342 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 RPS6KA2Q15349 733 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 SLC25A35Q3KQZ1 300 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 C1orf185Q5T7R7 199 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 MILR1Q7Z6M3 343 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 LCA5Q86VQ0 697 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 LIX1Q8N485 282 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 FAM13CQ8NE31 585 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 OR5M9Q8NGP3 310 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 OR10Q1Q8NGQ4 319 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 PAFAH2Q99487 392 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 DOHHQ9BU89 302 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 MRPL46Q9H2W6 279 aaKnown RBP11.95□□□□□ -0.5
RPAIN-202ENST00000381208 CDC42EP4Q9H3Q1 356 aaKnown RBP11.95□□□□□ -0.5
RPAIN-202ENST00000381208 ZNF703Q9H7S9 590 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-202ENST00000381208 BRF2Q9HAW0 419 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 XPR1Q9UBH6 696 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 KCNN3Q9UGI6 736 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 PCTPQ9UKL6 214 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 SNX6Q9UNH7 406 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 CHCHD2Q9Y6H1 151 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-202ENST00000381208 F8P00451 2351 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 FBN2P35556 2912 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 POLQO75417 2590 aa11.95□□□□□ -0.5
RPAIN-202ENST00000381208 PHF3Q92576 2039 aaKnown RBP11.95□□□□□ -0.5
RPAIN-202ENST00000381208 SPG11Q96JI7 2443 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 OTOGQ6ZRI0 2925 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 C1orf226A1L170 272 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 LRRC14BA6NHZ5 514 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 GOLGA6L10A6NI86 522 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 GLOD5A6NK44 160 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 FAM90A27PA6NNH2 459 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 HRKO00198 91 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 OR7A17O14581 309 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 ACSL3O95573 720 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 PORP16435 677 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-202ENST00000381208 NAGAP17050 411 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 TFF3Q07654 80 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 TRAF3Q13114 568 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 CCNYL2Q5T2Q4 361 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms