RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 PPP3R2Q96LZ3 170 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 TSSK3Q96PN8 268 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.04■□□□□ 0.48
GTF3A-201ENST00000381140 MYNNQ9NPC7 610 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 MIEF1Q9NQG6 463 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 ANKRD10Q9NXR5 420 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 PPIEQ9UNP9 301 aaKnown RBP18.04■□□□□ 0.48
GTF3A-201ENST00000381140 B3GNT3Q9Y2A9 372 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 AKAP10O43572 662 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 SLC28A2O43868 658 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 PRKNO60260 465 aaPredicted RBP18.04■□□□□ 0.48
GTF3A-201ENST00000381140 ZFAND5O76080 213 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 LRATO95237 230 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 CSNK2A2P19784 350 aaPredicted RBP18.04■□□□□ 0.48
GTF3A-201ENST00000381140 GSTM5P46439 218 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 GPR143P51810 404 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 PLEKHN1Q494U1 663 aaPredicted RBP18.04■□□□□ 0.48
GTF3A-201ENST00000381140 HSDL2Q6YN16 418 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 C16orf47Q6ZP98 133 aaPredicted RBP18.04■□□□□ 0.48
GTF3A-201ENST00000381140 RFWD2Q8NHY2 731 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 ZNF721Q8TF20 911 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 STON2Q8WXE9 905 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 CNRIP1Q96F85 164 aaPredicted RBP18.04■□□□□ 0.48
GTF3A-201ENST00000381140 METTL2AQ96IZ6 378 aaKnown RBP18.04■□□□□ 0.48
GTF3A-201ENST00000381140 EGLN2Q96KS0 407 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 ART5Q96L15 291 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 C1orf50Q9BV19 199 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 BRINP2Q9C0B6 783 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 SLAMF7Q9NQ25 335 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 GIMAP4Q9NUV9 329 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 MARCOQ9UEW3 520 aaPredicted RBP18.04■□□□□ 0.48
GTF3A-201ENST00000381140 BAIAP2L1Q9UHR4 511 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 ENTPD4Q9Y227 616 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 ARL2BPQ9Y2Y0 163 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 USH1CQ9Y6N9 552 aa18.04■□□□□ 0.48
GTF3A-201ENST00000381140 GABRR3A8MPY1 467 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 NPIPB8E9PQR5 432 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 KITP10721 976 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 SDC1P18827 310 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 OC90Q02509 493 aaPredicted RBP18.03■□□□□ 0.48
GTF3A-201ENST00000381140 DUSP2Q05923 314 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 FAM71E1Q6IPT2 247 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 TICAM1Q8IUC6 712 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 GALNT12Q8IXK2 581 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 ANKS4BQ8N8V4 417 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 FNDC5Q8NAU1 212 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 ADCY4Q8NFM4 1077 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 PNPLA2Q96AD5 504 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 FBXL20Q96IG2 436 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 CCT7Q99832 543 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 NUF2Q9BZD4 464 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 CXorf21Q9HAI6 301 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 MAP10Q9P2G4 905 aa18.03■□□□□ 0.48
GTF3A-201ENST00000381140 EML6Q6ZMW3 1958 aa18.02■□□□□ 0.48
GTF3A-201ENST00000381140 OR5H15A6NDH6 313 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 TTLL8A6PVC2 850 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 FCHO1O14526 889 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 ZNF195O14628 629 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 SUV39H1O43463 412 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 CT62P0C5K7 136 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 DDCP20711 480 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 MAPK1P28482 360 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 SSTR4P31391 388 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 MLF1P58340 268 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 LTB4RQ15722 352 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 SPRED3Q2MJR0 410 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 C6orf136Q5SQH8 315 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 ANKRD26P1Q6NSI1 321 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 RNF111Q6ZNA4 994 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 ZNF605Q86T29 641 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 LRRC25Q8N386 305 aaPredicted RBP18.02■□□□□ 0.47
GTF3A-201ENST00000381140 THOC1Q96FV9 657 aaKnown RBP18.02■□□□□ 0.47
GTF3A-201ENST00000381140 FCRL1Q96LA6 429 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 BBS4Q96RK4 519 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 UTP23Q9BRU9 249 aaKnown RBP18.02■□□□□ 0.47
GTF3A-201ENST00000381140 SLC35C2Q9NQQ7 365 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 DCTN4Q9UJW0 460 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 TMED5Q9Y3A6 229 aa18.02■□□□□ 0.47
GTF3A-201ENST00000381140 CFAP46Q8IYW2 2715 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 WWP2O00308 870 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 HDAC3O15379 428 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 BCKDHAP12694 445 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 CASRP41180 1078 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 ARFIP2P53365 341 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 RNF4P78317 190 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 ZNF169Q14929 603 aaPredicted RBP18.01■□□□□ 0.47
GTF3A-201ENST00000381140 TLR1Q15399 786 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 PRSS53Q2L4Q9 553 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 FAM111BQ6SJ93 734 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 Q6ZS92 163 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 IKBIPQ70UQ0 350 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 MAVSQ7Z434 540 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 CCDC116Q8IYX3 515 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 LGI4Q8N135 537 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 LIX1Q8N485 282 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.01■□□□□ 0.471e-8■□□□□ 11.1
GTF3A-201ENST00000381140 HAS2Q92819 552 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 GAL3ST4Q96RP7 486 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 TRIM4Q9C037 500 aa18.01■□□□□ 0.47
GTF3A-201ENST00000381140 A0A0G2JND7 137 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms