RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 TRIM3O75382 744 aaPredicted RBP14.66□□□□□ -0.06
VCX3A-201ENST00000381089 SEC31AO94979 1220 aaKnown RBP14.66□□□□□ -0.06
VCX3A-201ENST00000381089 LRATO95237 230 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 WISP3O95389 354 aaPredicted RBP14.66□□□□□ -0.06
VCX3A-201ENST00000381089 GPR75O95800 540 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 CTSSP25774 331 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 CDK9P50750 372 aaKnown RBP14.66□□□□□ -0.06
VCX3A-201ENST00000381089 ZNF136P52737 540 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 ARFIP1P53367 373 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 NRG3P56975 720 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 SLC37A1P57057 533 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 LTBQ06643 244 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 DDX39BQ13838 428 aaKnown RBP14.66□□□□□ -0.06
VCX3A-201ENST00000381089 RCAN2Q14206 197 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 E2F2Q14209 437 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 EBPQ15125 230 aaKnown RBP14.66□□□□□ -0.06
VCX3A-201ENST00000381089 TOMM20Q15388 145 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 DGAT2L6Q6ZPD8 337 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 TAOK1Q7L7X3 1001 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 ZNF572Q7Z3I7 529 aaPredicted RBP14.66□□□□□ -0.06
VCX3A-201ENST00000381089 ZBED8Q8IZ13 594 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 STAG3L4Q8TBR4 150 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 TRIB1Q96RU8 372 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 SECISBP2Q96T21 854 aaKnown RBP14.66□□□□□ -0.06
VCX3A-201ENST00000381089 LYARQ9NX58 379 aaKnown RBP14.66□□□□□ -0.06
VCX3A-201ENST00000381089 NUDT4Q9NZJ9 180 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 OPTCQ9UBM4 332 aa14.66□□□□□ -0.06
VCX3A-201ENST00000381089 MTO1Q9Y2Z2 717 aaKnown RBP14.66□□□□□ -0.06
VCX3A-201ENST00000381089 CLCA1A8K7I4 914 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 K7EPI3 171 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 CDH16O75309 829 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 ERN1O75460 977 aaKnown RBP14.65□□□□□ -0.06
VCX3A-201ENST00000381089 IL18BPO95998 194 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 HPNP05981 417 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 NR2F6P10588 404 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 EPB42P16452 691 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 EPORP19235 508 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 GALNSP34059 522 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 PIK3CBP42338 1070 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 WNT3P56703 355 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 C6orf163Q5TEZ5 329 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 C18orf63Q68DL7 685 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 GRHL2Q6ISB3 625 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 CYP20A1Q6UW02 462 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 CAPN12Q6ZSI9 719 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 MYLK4Q86YV6 388 aaPredicted RBP14.65□□□□□ -0.06
VCX3A-201ENST00000381089 MNS1Q8NEH6 495 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 WFDC11Q8NEX6 87 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 LINC01560Q8TB33 94 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 TP53INP1Q96A56 240 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 REPS1Q96D71 796 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 RILPQ96NA2 401 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 CPNE1Q99829 537 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 MCMBPQ9BTE3 642 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 SORBS1Q9BX66 1292 aaKnown RBP14.65□□□□□ -0.06
VCX3A-201ENST00000381089 EPB41L4BQ9H329 900 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 CALHM2Q9HA72 323 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 BEX4Q9NWD9 120 aaPredicted RBP14.65□□□□□ -0.06
VCX3A-201ENST00000381089 C15orf41Q9Y2V0 281 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 ANGPTL3Q9Y5C1 460 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 VPS13CQ709C8 3753 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 FREM3P0C091 2139 aa14.65□□□□□ -0.06
VCX3A-201ENST00000381089 MBD3L4A6NDZ8 208 aaPredicted RBP14.64□□□□□ -0.07
VCX3A-201ENST00000381089 MBD3L3A6NE82 208 aaPredicted RBP14.64□□□□□ -0.07
VCX3A-201ENST00000381089 MBD3L5A6NJ08 208 aaPredicted RBP14.64□□□□□ -0.07
VCX3A-201ENST00000381089 SUPT3HB4E1H0 165 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 E7ESA3 106 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 PLPP1O14494 284 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 RAD51CO43502 376 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 SUPT3HO75486 399 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 ACSL3O95573 720 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 CTAGE8P0CG41 777 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 SLC35E2BP0CK96 405 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 SLC35E2P0CK97 266 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 KRT15P19012 456 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 PTX3P26022 381 aaPredicted RBP14.64□□□□□ -0.07
VCX3A-201ENST00000381089 RAB10P61026 200 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 DCAF7P61962 342 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 PCDH1Q08174 1060 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 FASTKD3Q14CZ7 662 aaKnown RBP14.64□□□□□ -0.07
VCX3A-201ENST00000381089 SETDB1Q15047 1291 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 PCBP2Q15366 365 aaKnown RBP eCLIP14.64□□□□□ -0.07
VCX3A-201ENST00000381089 NHSL2Q5HYW2 709 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 SHEQ5VZ18 495 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 VASNQ6EMK4 673 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 CTAGE4Q8IX94 777 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 HUS1BQ8NHY5 278 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 MBD3L2Q8NHZ7 208 aaPredicted RBP14.64□□□□□ -0.07
VCX3A-201ENST00000381089 SPPL2AQ8TCT8 520 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 PYROXD1Q8WU10 500 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 ABTB1Q969K4 478 aaPredicted RBP14.64□□□□□ -0.07
VCX3A-201ENST00000381089 GPR22Q99680 433 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 ANGPTL4Q9BY76 406 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 TRIM31Q9BZY9 425 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 PLEKHF2Q9H8W4 249 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 SLC6A5Q9Y345 797 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 PCDHGA11Q9Y5H2 935 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 NPFFR2Q9Y5X5 522 aa14.64□□□□□ -0.07
VCX3A-201ENST00000381089 EFCAB8A8MWE9 144 aa14.63□□□□□ -0.07
VCX3A-201ENST00000381089 ARHGEF9O43307 516 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms