RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 OR14A16Q8NHC5 309 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 DAZLQ92904 295 aaKnown RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 VPS50Q96JG6 964 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 PELOQ9BRX2 385 aaKnown RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 DUSP26Q9BV47 211 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 BHLHE41Q9C0J9 482 aaPredicted RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 ATAD3AQ9NVI7 634 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 PPIEQ9UNP9 301 aaKnown RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 KCNMB2Q9Y691 235 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 SCN2BO60939 215 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 NT5EP21589 574 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 NTSP30990 170 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 KIR3DL1P43629 444 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 MANFP55145 182 aaKnown RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 WNT3P56703 355 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 SLC26A5P58743 744 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 MRPS35P82673 323 aaKnown RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 SRSF11Q05519 484 aaKnown RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 SQLEQ14534 574 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 ZNF267Q14586 743 aaPredicted RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 SPRED3Q2MJR0 410 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 PRICKLE4Q2TBC4 344 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 BTBD16Q32M84 506 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 PLAG1Q6DJT9 500 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 FAM111BQ6SJ93 734 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 ZNF551Q7Z340 670 aaPredicted RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 GALNT12Q8IXK2 581 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 CPSF7Q8N684 471 aaKnown RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 GLB1L3Q8NCI6 653 aaPredicted RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 APCDD1LQ8NCL9 501 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 MORN4Q8NDC4 146 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 SIMC1Q8NDZ2 872 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 B3GNT7Q8NFL0 401 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 SLC2A12Q8TD20 617 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 KAT2AQ92830 837 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 SENP5Q96HI0 755 aaPredicted RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 FER1L6-AS2Q96M78 137 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 ZBTB18Q99592 522 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 OR8D2Q9GZM6 311 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 ING2Q9H160 280 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 ACSS1Q9NUB1 689 aaPredicted RBP11.81□□□□□ -0.52
SMN1-202ENST00000380707 MAT2BQ9NZL9 334 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 CCDC167Q9P0B6 97 aa11.81□□□□□ -0.52
SMN1-202ENST00000380707 FAM234BA2RU67 622 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 DNAJB5O75953 348 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 FAM107AO95990 144 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 IGKV3-11P04433 115 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 PGRP06401 933 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 DDX5P17844 614 aaKnown RBP11.8□□□□□ -0.52
SMN1-202ENST00000380707 S1PR1P21453 382 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 S100A3P33764 101 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 POLR2JP52435 117 aaKnown RBP11.8□□□□□ -0.52
SMN1-202ENST00000380707 RRADP55042 308 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 IRX1P78414 480 aaPredicted RBP11.8□□□□□ -0.52
SMN1-202ENST00000380707 MAP4K2Q12851 820 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 HSPB3Q12988 150 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 UBAP2LQ14157 1087 aaKnown RBP11.8□□□□□ -0.52
SMN1-202ENST00000380707 EXT1Q16394 746 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 ST3GAL2Q16842 350 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 DPY19L1Q2PZI1 675 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 AGKQ53H12 422 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 TRMT12Q53H54 448 aaKnown RBP11.8□□□□□ -0.52
SMN1-202ENST00000380707 ZNF628Q5EBL2 1059 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 KIF2BQ8N4N8 673 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 CLEC1AQ8NC01 280 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 OR1N1Q8NGS0 311 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 M1APQ8TC57 530 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 ZNF721Q8TF20 911 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 NCLNQ969V3 563 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 CTHRC1Q96CG8 243 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 ZBED6CLQ96FA7 236 aaPredicted RBP11.8□□□□□ -0.52
SMN1-202ENST00000380707 FBXL20Q96IG2 436 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 CNPPD1Q9BV87 410 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 NMUR2Q9GZQ4 415 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 ANKRA2Q9H9E1 313 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 ATP13A2Q9NQ11 1180 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 SAR1AQ9NR31 198 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 MED13Q9UHV7 2174 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 ZNF639Q9UID6 485 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 ERVK-11Q9UQG0 969 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 ERVK-19Q9WJR5 959 aa11.8□□□□□ -0.52
SMN1-202ENST00000380707 PRRC2CQ9Y520 2896 aaKnown RBP11.79□□□□□ -0.52
SMN1-202ENST00000380707 A0A1W2PRB8 838 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 DYRK3O43781 588 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 KALRNO60229 2985 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 CLPSP04118 112 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 IL6P05231 212 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 ITGAMP11215 1152 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 ICAM2P13598 275 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 SSTR4P31391 388 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 FUT7Q11130 342 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 AIMP2Q13155 320 aaKnown RBP11.79□□□□□ -0.52
SMN1-202ENST00000380707 MLC1Q15049 377 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 C19orf48Q6RUI8 117 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 TMEM107Q6UX40 140 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 MTDHQ86UE4 582 aaKnown RBP11.79□□□□□ -0.52
SMN1-202ENST00000380707 ANKRD46Q86W74 232 aa11.79□□□□□ -0.52
SMN1-202ENST00000380707 APLFQ8IW19 511 aaPredicted RBP11.79□□□□□ -0.52
SMN1-202ENST00000380707 KBTBD2Q8IY47 623 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms