RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 PLEKHA8Q96JA3 519 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 TREX2Q9BQ50 279 aaPredicted RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 RLIMQ9NVW2 624 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 IMPAD1Q9NX62 359 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 AASSQ9UDR5 926 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 A0A1W2PR48 441 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 MPZL2O60487 215 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 ZBTB11O95625 1053 aaPredicted RBP11.92□□□□□ -0.5
VPS16-202ENST00000380445 MT-ND2P03891 347 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 ASGR2P07307 311 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 CSNK2A2P19784 350 aaPredicted RBP11.92□□□□□ -0.5
VPS16-202ENST00000380445 CBLP22681 906 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 ACTR1BP42025 376 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 CDC42P60953 191 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 ACTR1AP61163 376 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 PRR5P85299 388 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 ATP1A4Q13733 1029 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 KIR2DS3Q14952 304 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 LAIR1Q6GTX8 287 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 SLC48A1Q6P1K1 146 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 OR9Q2Q8NGE9 314 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 OR56A1Q8NGH5 318 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 BBS10Q8TAM1 723 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 APH1BQ8WW43 257 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 COL21A1Q96P44 957 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 CSF3RQ99062 836 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 ROGDIQ9GZN7 287 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 ACOT13Q9NPJ3 140 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 FBXW2Q9UKT8 454 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 ATG4BQ9Y4P1 393 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 SNX11Q9Y5W9 270 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 CCDC88CQ9P219 2028 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 TOR1BO14657 336 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 FOXD2O60548 495 aaPredicted RBP11.92□□□□□ -0.5
VPS16-202ENST00000380445 BCAS1O75363 584 aaPredicted RBP11.92□□□□□ -0.5
VPS16-202ENST00000380445 FHP07954 510 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 AK4P27144 223 aaPredicted RBP11.92□□□□□ -0.5
VPS16-202ENST00000380445 IDH2P48735 452 aaKnown RBP11.92□□□□□ -0.5
VPS16-202ENST00000380445 RGS19P49795 217 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 CCDC81Q6ZN84 652 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 AHSA2Q719I0 299 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 PAQR7Q86WK9 346 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 AQP11Q8NBQ7 271 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 UTP15Q8TED0 518 aaKnown RBP11.92□□□□□ -0.5
VPS16-202ENST00000380445 UBE2FQ969M7 185 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 GAL3ST3Q96A11 431 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 BMFQ96LC9 184 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 COPS4Q9BT78 406 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 GIN1Q9NXP7 522 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 RABL2AQ9UBK7 228 aaPredicted RBP11.92□□□□□ -0.5
VPS16-202ENST00000380445 KLF15Q9UIH9 416 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 RBMX2Q9Y388 322 aaKnown RBP11.92□□□□□ -0.5
VPS16-202ENST00000380445 ZNF780BQ9Y6R6 833 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 CDH23Q9H251 3354 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 CEP290O15078 2479 aa11.92□□□□□ -0.5
VPS16-202ENST00000380445 SLC22A1O15245 554 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 AIFM1O95831 613 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 RECKO95980 971 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 ADAP00813 363 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 VIPP01282 170 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 F3P13726 295 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 ACVR2AP27037 513 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 CD6P30203 668 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 AKT2P31751 481 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 ACSL1P33121 698 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 TPMTP51580 245 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 LIM2P55344 173 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 FBXO43Q4G163 708 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 DCST1Q5T197 706 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 FAAH2Q6GMR7 532 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 SLC16A12Q6ZSM3 486 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 GPR32P1Q8NGA4 272 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 UCN3Q969E3 161 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 TSACCQ96A04 125 aaPredicted RBP11.91□□□□□ -0.5
VPS16-202ENST00000380445 MACROD1Q9BQ69 325 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 NMNAT1Q9HAN9 279 aaPredicted RBP11.91□□□□□ -0.5
VPS16-202ENST00000380445 C3orf14Q9HBI5 128 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 BCL2L10Q9HD36 194 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 NECTIN3Q9NQS3 549 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 ZNF624Q9P2J8 865 aaPredicted RBP11.91□□□□□ -0.5
VPS16-202ENST00000380445 MGAT4BQ9UQ53 548 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 SLC9A8Q9Y2E8 581 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 TMA7Q9Y2S6 64 aaKnown RBP11.91□□□□□ -0.5
VPS16-202ENST00000380445 URADA6NGE7 173 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 GLOD5A6NK44 160 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 CLCA1A8K7I4 914 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 PGRMC2O15173 223 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 PROM1O43490 865 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 CLPXO76031 633 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 GABARAPO95166 117 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 RASGRP1O95267 797 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 FADS2O95864 444 aaKnown RBP11.91□□□□□ -0.5
VPS16-202ENST00000380445 STATHP02808 62 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 H1F0P07305 194 aaKnown RBP11.91□□□□□ -0.5
VPS16-202ENST00000380445 SLC35G6P0C7Q6 338 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 HOXB3P14651 431 aaPredicted RBP11.91□□□□□ -0.5
VPS16-202ENST00000380445 CERS1P27544 350 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 PSMB9P28065 219 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 MAP2K4P45985 399 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 RAB8AP61006 207 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms