RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 RPL5P46777 297 aaKnown RBP18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 CAPZBP47756 277 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 KHKP50053 298 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 PRR5P85299 388 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 SIM2Q14190 667 aaPredicted RBP18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 RFX4Q33E94 735 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 KDM4DQ6B0I6 523 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 GALNT5Q7Z7M9 940 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 COL26A1Q96A83 441 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 C16orf58Q96GQ5 468 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 MAP3K3Q99759 626 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 TREX2Q9BQ50 279 aaPredicted RBP18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 C3orf14Q9HBI5 128 aa18.68■□□□□ 0.58
PDLIM5-205ENST00000380180 LILRA5A6NI73 299 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 GALR3O60755 368 aaPredicted RBP18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 PDE9AO76083 593 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 RECKO95980 971 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 NR2F1P10589 423 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 ITGA2P17301 1181 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 ZC3H12BQ5HYM0 836 aaKnown RBP18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 OGFOD3Q6PK18 319 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 SATL1Q86VE3 508 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 LRRC25Q8N386 305 aaPredicted RBP18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 NUP43Q8NFH3 380 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 OR5T3Q8NGG3 340 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 FAM192AQ9GZU8 254 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 DUSP15Q9H1R2 295 aaPredicted RBP18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 ZNF451Q9Y4E5 1061 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 LYVE1Q9Y5Y7 322 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 LOC100130705A0A1B0GUX0 176 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 ADAMDEC1O15204 470 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 BCAT2O15382 392 aaPredicted RBP18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 CD247P20963 164 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 MAGEA8P43361 318 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 C21orf59P57076 290 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 PUM1Q14671 1186 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 KCTD21Q4G0X4 260 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 FAM92BQ6ZTR7 304 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 MCATQ8IVS2 390 aaKnown RBP18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 SDR16C5Q8N3Y7 309 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 METTL25Q8N6Q8 603 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 MIPOL1Q8TD10 442 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 ZNF607Q96SK3 696 aa18.67■□□□□ 0.58
PDLIM5-205ENST00000380180 UNC13CQ8NB66 2214 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 J3KTA2 159 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 TNFRSF11BO00300 401 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 PIAS2O75928 621 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 FESP07332 822 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 ANXA11P50995 505 aaKnown RBP18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 CDH15P55291 814 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 IL1RL1Q01638 556 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 USP53Q70EK8 1073 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 SAMD14Q8IZD0 417 aaPredicted RBP18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 PIK3C3Q8NEB9 887 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 GPR32P1Q8NGA4 272 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 GRIP2Q9C0E4 1043 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 CXorf56Q9H5V9 222 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 PRDM9Q9NQV7 894 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 MUTYHQ9UIF7 546 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 ARID1BQ8NFD5 2236 aaPredicted RBP18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 KIF1CO43896 1103 aaKnown RBP18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 PPP2R1BP30154 601 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 XCR1P46094 333 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 AFF3P51826 1226 aaKnown RBP18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 SPIBQ01892 262 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 TSSK4Q6SA08 328 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 OLIG3Q7RTU3 272 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 THAP5Q7Z6K1 395 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 C8orf59Q8N0T1 100 aaPredicted RBP18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 DNAJC22Q8N4W6 341 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 ATG16L2Q8NAA4 619 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 OR52J3Q8NH60 311 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 APOBEC4Q8WW27 367 aaKnown RBP18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 COL21A1Q96P44 957 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 EQTNQ9NQ60 294 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 EXD2Q9NVH0 621 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 KCNE3Q9Y6H6 103 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 ENPP4Q9Y6X5 453 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 SPACA6W5XKT8 324 aa18.66■□□□□ 0.58
PDLIM5-205ENST00000380180 ASXL3Q9C0F0 2248 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 SGK494L7N484 410 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 CYR61O00622 381 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 SLC16A6O15403 523 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 NME6O75414 186 aaPredicted RBP18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 JRKO75564 520 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 DNAJB5O75953 348 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 PABPC4LP0CB38 370 aaKnown RBP18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 ELK4P28324 431 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 PPM1FP49593 454 aaPredicted RBP18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 FUT5Q11128 374 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 C14orf28Q4W4Y0 310 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 WDR45BQ5MNZ6 344 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 FAHD1Q6P587 224 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 CA13Q8N1Q1 262 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 ARHGEF39Q8N4T4 335 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 TMEM52Q8NDY8 209 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 OR7G2Q8NG99 324 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 OR7D2Q96RA2 312 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 KIF17Q9P2E2 1029 aa18.65■□□□□ 0.58
PDLIM5-205ENST00000380180 SEC14L3Q9UDX4 400 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms