RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 NTSP30990 170 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 KLRB1Q12918 225 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 PRICKLE4Q2TBC4 344 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF750Q32MQ0 723 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 LINC00696Q6ZRV3 163 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 NATD1Q8N6N6 113 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 ACTRT2Q8TDY3 377 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 HAS2Q92819 552 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 PPCDCQ96CD2 204 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 CTHRC1Q96CG8 243 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 PRPF18Q99633 342 aaKnown RBP12.32□□□□□ -0.44
CKAP2-202ENST00000378034 CNPPD1Q9BV87 410 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 ATP6V1HQ9UI12 483 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 ERVK-19Q9WJR5 959 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 USH1CQ9Y6N9 552 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 TNRC6AQ8NDV7 1962 aaKnown RBP12.32□□□□□ -0.44
CKAP2-202ENST00000378034 CHD6Q8TD26 2715 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 DYTNA2CJ06 578 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 FCHO1O14526 889 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF195O14628 629 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 BCAS2O75934 225 aaPredicted RBP12.31□□□□□ -0.44
CKAP2-202ENST00000378034 IFI6P09912 130 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 CLDN8P56748 225 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 MLF1P58340 268 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 RNF4P78317 190 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 B3GNTL1Q67FW5 361 aaPredicted RBP12.31□□□□□ -0.44
CKAP2-202ENST00000378034 RNF111Q6ZNA4 994 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 CCDC116Q8IYX3 515 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 VWA5B2Q8N398 1253 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 AMER2Q8N7J2 671 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 NUBPLQ8TB37 319 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 CDCP1Q9H5V8 836 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 MAT2BQ9NZL9 334 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF639Q9UID6 485 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 ZFYVE26Q68DK2 2539 aa12.31□□□□□ -0.44
CKAP2-202ENST00000378034 GABRR3A8MPY1 467 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 SCAMP2O15127 329 aaKnown RBP12.3□□□□□ -0.44
CKAP2-202ENST00000378034 AKAP10O43572 662 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 LRATO95237 230 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 G6PDP11413 515 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 EPHA3P29320 983 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 SLC37A1P57057 533 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 MGAT2Q10469 447 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 PTGR1Q14914 329 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 EPGNQ6UW88 154 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF321PQ8N8H1 164 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 TEX19Q8NA77 164 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 CEP70Q8NHQ1 597 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 CLHC1Q8NHS4 586 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 SUN3Q8TAQ9 357 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 GFM2Q969S9 779 aaKnown RBP12.3□□□□□ -0.44
CKAP2-202ENST00000378034 NPAS2Q99743 824 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 BRINP2Q9C0B6 783 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 ZBTB20Q9HC78 741 aaPredicted RBP12.3□□□□□ -0.44
CKAP2-202ENST00000378034 ATAD3AQ9NVI7 634 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 ANAPC2Q9UJX6 822 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 CFL2Q9Y281 166 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 HRKO00198 91 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 PDPK1O15530 556 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 CT62P0C5K7 136 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 S1PR1P21453 382 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 FRKP42685 505 aaPredicted RBP12.3□□□□□ -0.44
CKAP2-202ENST00000378034 NCBP2P52298 156 aaKnown RBP eCLIP12.3□□□□□ -0.44
CKAP2-202ENST00000378034 ARG2P78540 354 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 DUSP2Q05923 314 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 PRSS53Q2L4Q9 553 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF628Q5EBL2 1059 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 FCRLBQ6BAA4 426 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 FAM180BQ6P0A1 224 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 FAM47EQ6ZV65 393 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 SLC29A4Q7RTT9 530 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 MAVSQ7Z434 540 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 RIMKLAQ8IXN7 391 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 BEST3Q8N1M1 668 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 RBMXL3Q8N7X1 1067 aaKnown RBP12.3□□□□□ -0.44
CKAP2-202ENST00000378034 ZFP28Q8NHY6 868 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 STON2Q8WXE9 905 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 SIKE1Q9BRV8 207 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 OR10A5Q9H207 317 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 WDR55Q9H6Y2 383 aaPredicted RBP12.3□□□□□ -0.44
CKAP2-202ENST00000378034 ACSS1Q9NUB1 689 aaPredicted RBP12.3□□□□□ -0.44
CKAP2-202ENST00000378034 SH3BP4Q9P0V3 963 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 MYOTQ9UBF9 498 aa12.3□□□□□ -0.44
CKAP2-202ENST00000378034 YARS2Q9Y2Z4 477 aaKnown RBP12.3□□□□□ -0.44
CKAP2-202ENST00000378034 GOLGA8QA0A0J9YX86 632 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 GOLGA8OA6NCC3 632 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 TCP11X1B4DZS4 312 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 GOLGA8NF8WBI6 632 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 EDF1O60869 148 aaKnown RBP12.29□□□□□ -0.44
CKAP2-202ENST00000378034 WDPCPO95876 746 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 CLPSP04118 112 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 TRHRP34981 398 aaPredicted RBP12.29□□□□□ -0.44
CKAP2-202ENST00000378034 CASRP41180 1078 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 DIO3P55073 304 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 NFATC3Q12968 1075 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 MPEG1Q2M385 716 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 SLC9B1Q4ZJI4 515 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 CPTPQ5TA50 214 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 Q6ZS92 163 aa12.29□□□□□ -0.44
CKAP2-202ENST00000378034 ACAD11Q709F0 780 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms