RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 CNTFP26441 200 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 DNAJA1P31689 397 aaKnown RBP17.65■□□□□ 0.42
CBWD3-204ENST00000377349 MAGEA12P43365 314 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 HERVK_113P63132 956 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 ERVK-8P63133 956 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 ZNF267Q14586 743 aaPredicted RBP17.65■□□□□ 0.42
CBWD3-204ENST00000377349 MPEG1Q2M385 716 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 ZNF791Q3KP31 576 aaPredicted RBP17.65■□□□□ 0.42
CBWD3-204ENST00000377349 B3GNT6Q6ZMB0 384 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 FAM47EQ6ZV65 393 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 C9orf40Q8IXQ3 194 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 CEP112Q8N8E3 955 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 L3MBTL4Q8NA19 623 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 WDR20Q8TBZ3 569 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 SENP5Q96HI0 755 aaPredicted RBP17.65■□□□□ 0.42
CBWD3-204ENST00000377349 SERPINI1Q99574 410 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 ERVK-6Q9BXR3 956 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 FUT8Q9BYC5 575 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 MRPL46Q9H2W6 279 aaKnown RBP17.65■□□□□ 0.42
CBWD3-204ENST00000377349 ELOVL6Q9H5J4 265 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 SPRR3Q9UBC9 169 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 ERVK-19Q9WJR5 959 aa17.65■□□□□ 0.42
CBWD3-204ENST00000377349 A0A0A6YYD5 115 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 ATP6AP2A0A1C7CYW4 349 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 PROM1O43490 865 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 ATP6AP2O75787 350 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 SNRPAP09012 282 aaKnown RBP17.64■□□□□ 0.42
CBWD3-204ENST00000377349 BSGP35613 385 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 PIGAP37287 484 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 ART1P52961 327 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 CUL3Q13618 768 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 PIGGQ5H8A4 983 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 FAM219BQ5XKK7 198 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 FRG2Q64ET8 278 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 OPN5Q6U736 354 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 MILR1Q7Z6M3 343 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 TMEM200AQ86VY9 491 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 IFT20Q8IY31 132 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 NUBPLQ8TB37 319 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 UCN3Q969E3 161 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 TRIM44Q96DX7 344 aaPredicted RBP17.64■□□□□ 0.42
CBWD3-204ENST00000377349 ART5Q96L15 291 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 FRG2BQ96QU4 278 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 MRPL57Q9BQC6 102 aaKnown RBP17.64■□□□□ 0.42
CBWD3-204ENST00000377349 MRPL1Q9BYD6 325 aaKnown RBP17.64■□□□□ 0.42
CBWD3-204ENST00000377349 PROK2Q9HC23 129 aa17.64■□□□□ 0.42
CBWD3-204ENST00000377349 IQANK1A0A1B0GTG1 560 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 A0A1W2PR48 441 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 STX16-NPEPL1H3BU86 382 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 STX16O14662 325 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 P04436 131 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 KLK1P06870 262 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 RFPL3SP0C7P2 107 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 ZFP36L2P47974 494 aaKnown RBP17.64■□□□□ 0.41
CBWD3-204ENST00000377349 CDH13P55290 713 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 TRAF3Q13114 568 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 LGSNQ5TDP6 509 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 RNF111Q6ZNA4 994 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 SLC29A4Q7RTT9 530 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 OR4F6Q8NGB9 312 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 OR10Q1Q8NGQ4 319 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 SLC22A8Q8TCC7 542 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 RIT1Q92963 219 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 ISL2Q96A47 359 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 ZNF717Q9BY31 904 aaPredicted RBP17.64■□□□□ 0.41
CBWD3-204ENST00000377349 ZNF703Q9H7S9 590 aaPredicted RBP17.64■□□□□ 0.41
CBWD3-204ENST00000377349 TEX10Q9NXF1 929 aaPredicted RBP17.64■□□□□ 0.41
CBWD3-204ENST00000377349 ZNF180Q9UJW8 692 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 SLC12A4Q9UP95 1085 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 TSC22D4Q9Y3Q8 395 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 ASB4Q9Y574 426 aa17.64■□□□□ 0.41
CBWD3-204ENST00000377349 LRRC3CA6NJW4 275 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 A8MT66 165 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 FOXE1O00358 373 aaPredicted RBP17.63■□□□□ 0.41
CBWD3-204ENST00000377349 WDR1O75083 606 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 GPR75O95800 540 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 COL6A2P12110 1019 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 MAN2A2P49641 1150 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 SLC10A1Q14973 349 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 C6orf163Q5TEZ5 329 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 CES4AQ5XG92 561 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 METTL2BQ6P1Q9 378 aaKnown RBP17.63■□□□□ 0.41
CBWD3-204ENST00000377349 SEM1Q6ZVN7 128 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 GSPT2Q8IYD1 628 aaKnown RBP17.63■□□□□ 0.41
CBWD3-204ENST00000377349 ST13P4Q8IZP2 240 aaPredicted RBP17.63■□□□□ 0.41
CBWD3-204ENST00000377349 CLYBLQ8N0X4 340 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 FAM13CQ8NE31 585 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 TRPC4APQ8TEL6 797 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 PAQR8Q8TEZ7 354 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 FBXL20Q96IG2 436 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 HBEGFQ99075 208 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 DDX31Q9H8H2 851 aaKnown RBP17.63■□□□□ 0.41
CBWD3-204ENST00000377349 ZBTB26Q9HCK0 441 aa17.63■□□□□ 0.41
CBWD3-204ENST00000377349 FARSBQ9NSD9 589 aaKnown RBP17.63■□□□□ 0.41
CBWD3-204ENST00000377349 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.63■□□□□ 0.41
CBWD3-204ENST00000377349 MED12LQ86YW9 2145 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 GOLGA8RI6L899 631 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 HCN1O60741 890 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 LRATO95237 230 aa17.62■□□□□ 0.41
CBWD3-204ENST00000377349 OTCP00480 354 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms