RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 PROKR2Q8NFJ6 384 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 XAGE5Q8WWM1 108 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 UCN3Q969E3 161 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 NDUFB11Q9NX14 153 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 EDDM13A0A1B0GTR0 161 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 PRAMEF27A3QJZ7 478 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 H3BQ06 376 aaPredicted RBP23.94■■□□□ 1.42
C9orf40-201ENST00000376854 M0R3H8 397 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 NDUFS4O43181 175 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 TP53P04637 393 aaPredicted RBP23.94■■□□□ 1.42
C9orf40-201ENST00000376854 NKX2-5P52952 324 aaPredicted RBP23.94■■□□□ 1.42
C9orf40-201ENST00000376854 C1DQ13901 141 aaKnown RBP23.94■■□□□ 1.42
C9orf40-201ENST00000376854 PODNL1Q6PEZ8 512 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 PAQR6Q6TCH4 344 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 COMTD1Q86VU5 262 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 SFTPA1Q8IWL2 248 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 OR5D16Q8NGK9 328 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 GPR151Q8TDV0 419 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 RGMAQ96B86 450 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 ZFYVE19Q96K21 471 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 OR51I1Q9H343 314 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 TBC1D24Q9ULP9 559 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 ZNF670-ZNF695F2Z2N8 137 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 MYL12BO14950 172 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 TLX2O43763 284 aaPredicted RBP23.93■■□□□ 1.42
C9orf40-201ENST00000376854 TPST2O60704 377 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 ADH1CP00326 375 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 VIPR2P41587 438 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 ELAVL3Q14576 367 aaKnown RBP23.93■■□□□ 1.42
C9orf40-201ENST00000376854 ERN2Q76MJ5 926 aaKnown RBP23.93■■□□□ 1.42
C9orf40-201ENST00000376854 TM7SF3Q9NS93 570 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 ACSS1Q9NUB1 689 aaPredicted RBP23.93■■□□□ 1.42
C9orf40-201ENST00000376854 HOXC11O43248 304 aaPredicted RBP23.93■■□□□ 1.42
C9orf40-201ENST00000376854 PRKYO43930 277 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 CYP7B1O75881 506 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 NR2F1P10589 423 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 SLC6A11P48066 632 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 CAMK1Q14012 370 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 TMEM52BQ4KMG9 183 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 RNLSQ5VYX0 342 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 TBC1D19Q8N5T2 526 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 OR9Q1Q8NGQ5 310 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 CXorf40AQ8TE69 158 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 ASB15Q8WXK1 588 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 SLC35G5Q96KT7 338 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 OR2A14Q96R47 310 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 TRPC4Q9UBN4 977 aa23.93■■□□□ 1.42
C9orf40-201ENST00000376854 KIF26AQ9ULI4 1882 aaPredicted RBP23.93■■□□□ 1.42
C9orf40-201ENST00000376854 A0A1W2PRQ8 180 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 HYKKA2RU49 373 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 OR1F1O43749 312 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 FGBP02675 491 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 RPN2P04844 631 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 ALDH6A1Q02252 535 aaKnown RBP23.92■■□□□ 1.42
C9orf40-201ENST00000376854 MLLT11Q13015 90 aaPredicted RBP23.92■■□□□ 1.42
C9orf40-201ENST00000376854 AGAP6Q5VW22 663 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 LIPKQ5VXJ0 399 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 UBE3DQ7Z6J8 389 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 AMER3Q8N944 861 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 IL17RCQ8NAC3 791 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 TMCO6Q96DC7 493 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 AGAP4Q96P64 663 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 FNDC11Q9BVV2 318 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 HCN2Q9UL51 889 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 SSR3Q9UNL2 185 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 A0A0G2JN53 185 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 GPC1P35052 558 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 HSD17B2P37059 387 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 PHC2Q8IXK0 858 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 COX14Q96I36 57 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 PCBD2Q9H0N5 130 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 KLHL20Q9Y2M5 609 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 MRPS23Q9Y3D9 190 aaKnown RBP23.92■■□□□ 1.42
C9orf40-201ENST00000376854 V9GYH0 126 aa23.92■■□□□ 1.42
C9orf40-201ENST00000376854 NINQ8N4C6 2090 aa23.91■■□□□ 1.42
C9orf40-201ENST00000376854 TCF20Q9UGU0 1960 aaKnown RBP23.91■■□□□ 1.42
C9orf40-201ENST00000376854 NR4A2P43354 598 aa23.91■■□□□ 1.42
C9orf40-201ENST00000376854 RUNX1T1Q06455 604 aa23.91■■□□□ 1.42
C9orf40-201ENST00000376854 TMPRSS11AQ6ZMR5 421 aa23.91■■□□□ 1.42
C9orf40-201ENST00000376854 OLIG3Q7RTU3 272 aa23.91■■□□□ 1.42
C9orf40-201ENST00000376854 FAM26EQ8N5C1 309 aa23.91■■□□□ 1.42
C9orf40-201ENST00000376854 ZNF764Q96H86 408 aaPredicted RBP23.91■■□□□ 1.42
C9orf40-201ENST00000376854 MENTQ9BUN1 341 aa23.91■■□□□ 1.42
C9orf40-201ENST00000376854 POLDIP3Q9BY77 421 aaKnown RBP23.91■■□□□ 1.42
C9orf40-201ENST00000376854 SIAEQ9HAT2 523 aa23.91■■□□□ 1.42
C9orf40-201ENST00000376854 KCNK12Q9HB15 430 aa23.91■■□□□ 1.42
C9orf40-201ENST00000376854 ANTXRLA6NF34 631 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 OTOL1A6NHN0 477 aaPredicted RBP23.9■■□□□ 1.42
C9orf40-201ENST00000376854 CCNKO75909 580 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 MMP11P24347 488 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 PPP2R1BP30154 601 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 OR2B6P58173 313 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 LRRTM4Q86VH4 590 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 LAX1Q8IWV1 398 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 ZNF707Q96C28 371 aaPredicted RBP23.9■■□□□ 1.42
C9orf40-201ENST00000376854 GLIPR2Q9H4G4 154 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 MUTYHQ9UIF7 546 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 A0A1W2PPV9 198 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 SERPIND1P05546 499 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 TGM4P49221 684 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms