RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 EXOSC8Q96B26 276 aaKnown RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 MRPL38Q96DV4 380 aaKnown RBP13.25□□□□□ -0.29
MSH5-202ENST00000375740 CITED4Q96RK1 184 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 APOOQ9BUR5 198 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 MMP27Q9H306 513 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 ANGPT4Q9Y264 503 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 SNX11Q9Y5W9 270 aa13.25□□□□□ -0.29
MSH5-202ENST00000375740 MYO9BQ13459 2157 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 CENPXA8MT69 81 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 J3KTA2 159 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 ADAMDEC1O15204 470 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 SLC31A1O15431 190 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 IFNA14P01570 189 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 STATHP02808 62 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 GADD45AP24522 165 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 CDH12P55289 794 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 SPIBQ01892 262 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 MVKQ03426 396 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 MAD2L1BPQ15013 274 aaPredicted RBP13.24□□□□□ -0.29
MSH5-202ENST00000375740 SAXO2Q658L1 398 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 UBQLNLQ8IYU4 475 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 SLC5A8Q8N695 610 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 HORMAD2Q8N7B1 307 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 OR4C15Q8NGM1 316 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 CREB3L4Q8TEY5 395 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 KCNC2Q96PR1 638 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 SDHCQ99643 169 aaPredicted RBP13.24□□□□□ -0.29
MSH5-202ENST00000375740 ERVK13-1Q9NX77 482 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 TEX10Q9NXF1 929 aaPredicted RBP13.24□□□□□ -0.29
MSH5-202ENST00000375740 CRNNQ9UBG3 495 aaPredicted RBP13.24□□□□□ -0.29
MSH5-202ENST00000375740 A0A0G2JMP0 313 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 A0A0X1KG70 313 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 SAGE2PA6NJ88 616 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 JUNDP17535 347 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 PKLRP30613 574 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 NTSR1P30989 418 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 IFNA8P32881 189 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 PCBP4P57723 403 aaKnown RBP13.24□□□□□ -0.29
MSH5-202ENST00000375740 HSPB3Q12988 150 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 IRF3Q14653 427 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 OR4C11Q6IEV9 310 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 TNFAIP8L2Q6P589 184 aaPredicted RBP13.24□□□□□ -0.29
MSH5-202ENST00000375740 Q6ZPB1 254 aaPredicted RBP13.24□□□□□ -0.29
MSH5-202ENST00000375740 AHSA2Q719I0 299 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 NRARPQ7Z6K4 114 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 NATD1Q8N6N6 113 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 OR52E1Q8NGJ3 308 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 OR2L8Q8NGY9 312 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 NEURL3Q96EH8 262 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 TEFMQ96QE5 360 aaKnown RBP13.24□□□□□ -0.29
MSH5-202ENST00000375740 AICDAQ9GZX7 198 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 SLC28A3Q9HAS3 691 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 THSD1Q9NS62 852 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 RLIMQ9NVW2 624 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 EHD3Q9NZN3 535 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 TPRKBQ9Y3C4 175 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 PCDHGB6Q9Y5F9 930 aa13.24□□□□□ -0.29
MSH5-202ENST00000375740 OR2A25A4D2G3 310 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 E9PQ18 207 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 AIREO43918 545 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 B4GALT2O60909 372 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 COL9A1P20849 921 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 ADPRHP54922 357 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 CXCR4P61073 352 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 EXOC3L2Q2M3D2 409 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 REEP3Q6NUK4 255 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 C6orf120Q7Z4R8 191 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 ELMOD2Q8IZ81 293 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 OR10G2Q8NGC3 310 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 PDXPQ96GD0 296 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 PITX2Q99697 317 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 MACROD1Q9BQ69 325 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 C17orf62Q9BQA9 187 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 BEX2Q9BXY8 128 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 KLHL31Q9H511 634 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 DDX31Q9H8H2 851 aaKnown RBP13.23□□□□□ -0.29
MSH5-202ENST00000375740 SCN3BQ9NY72 215 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 LRIT2A6NDA9 550 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 PRR19A6NJB7 356 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 WASHC1A8K0Z3 465 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 MEN1O00255 615 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 CLEC3AO75596 197 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 ITGA2P17301 1181 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 C21orf33P30042 268 aaPredicted RBP13.23□□□□□ -0.29
MSH5-202ENST00000375740 DUSP7Q16829 419 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 UAP1L1Q3KQV9 507 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 RPS26P11Q5JNZ5 115 aaPredicted RBP13.23□□□□□ -0.29
MSH5-202ENST00000375740 SDE2Q6IQ49 451 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 WASH2PQ6VEQ5 465 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 GEMIN6Q8WXD5 167 aaKnown RBP13.23□□□□□ -0.29
MSH5-202ENST00000375740 FYTTD1Q96QD9 318 aaKnown RBP13.23□□□□□ -0.29
MSH5-202ENST00000375740 GABARAPL3Q9BY60 117 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 SIRT3Q9NTG7 399 aaPredicted RBP13.23□□□□□ -0.29
MSH5-202ENST00000375740 GIMAP4Q9NUV9 329 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 MSRAQ9UJ68 235 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 ADAM29Q9UKF5 820 aa13.23□□□□□ -0.29
MSH5-202ENST00000375740 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.23□□□□□ -0.29
MSH5-202ENST00000375740 TRBC2A0A5B9 178 aa13.22□□□□□ -0.29
MSH5-202ENST00000375740 M0R082 166 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms