RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 RPL6Q02878 288 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GNA13Q14344 377 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 DUSP7Q16829 419 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CNPY1Q3B7I2 92 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 KLHL35Q6PF15 583 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TMEM107Q6UX40 140 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SZRD1Q7Z422 152 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ZNF761Q86XN6 746 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SDR16C5Q8N3Y7 309 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 DEFB119Q8N690 84 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SETD9Q8NE22 299 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 BBS10Q8TAM1 723 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GIPC3Q8TF64 312 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 DGCR14Q96DF8 476 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ELP4Q96EB1 424 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TREX2Q9BQ50 279 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TBC1D17Q9HA65 648 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 KRT84Q9NSB2 600 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 KCND3Q9UK17 655 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TESMINQ9Y4I5 508 aa16.95■□□□□ 0.3
HLA-DQB1-201ENST00000374943 A0A1W2PS29 197 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SERPINB7O75635 380 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OR6B1O95007 311 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 HMGN2P05204 90 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 KCNJ5P48544 419 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CRISP3P54108 245 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TPD52P55327 224 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MAZP56270 477 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ISL1P61371 349 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PPP1CAP62136 330 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SPIBQ01892 262 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ZP2Q05996 745 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SLC36A4Q6YBV0 504 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GALNT5Q7Z7M9 940 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 C17orf82Q86X59 251 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 LRRC25Q8N386 305 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ARL14Q8N4G2 192 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CSNK1A1LQ8N752 337 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ATG16L2Q8NAA4 619 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CHDHQ8NE62 594 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GPR32P1Q8NGA4 272 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OR5D16Q8NGK9 328 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OR9A2Q8NGT5 310 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 C1orf216Q8TAB5 229 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 NCSTNQ92542 709 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SPACA7Q96KW9 195 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GABARAPL3Q9BY60 117 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TRPC4Q9UBN4 977 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SH3GLB1Q9Y371 365 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CACNA1IQ9P0X4 2223 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 UBXN7O94888 489 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 FESP07332 822 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ALPPL2P10696 532 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ETS2P15036 469 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TYRP1P17643 537 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ELK4P28324 431 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 NXPH1P58417 271 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GABARAPL2P60520 117 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CD47Q08722 323 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TOP3AQ13472 1001 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PUM1Q14671 1186 aaKnown RBP eCLIP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 LASP1Q14847 261 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SYPL1Q16563 259 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 RBM44Q6ZP01 1051 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 USP53Q70EK8 1073 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 KRT73Q86Y46 540 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SLC44A2Q8IWA5 706 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 C19orf47Q8N9M1 422 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 NUP43Q8NFH3 380 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OR4K14Q8NGD5 310 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 LMX1AQ8TE12 382 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 XAGE5Q8WWM1 108 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PROX1Q92786 737 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CSF3RQ99062 836 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 PITX2Q99697 317 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 BTBD2Q9BX70 525 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 NPLQ9BXD5 320 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 RIBC2Q9H4K1 309 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MRPS2Q9Y399 296 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 FAM32AQ9Y421 112 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 SPACA6W5XKT8 324 aa16.94■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ARRDC5A6NEK1 342 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 GALR3O60755 368 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 IFI6P09912 130 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 NR2F1P10589 423 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ANXA8P13928 327 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ST6GAL1P15907 406 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 POLR2IP36954 125 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MC3RP41968 323 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CAPZBP47756 277 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MAN2A2P49641 1150 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CLK3P49761 638 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CDH12P55289 794 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 FUT5Q11128 374 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 MICAQ29983 383 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 CTU2Q2VPK5 515 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 C6orf141Q5SZD1 244 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 ZNF438Q7Z4V0 828 aa16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 TTC29Q8NA56 475 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-201ENST00000374943 OR10G2Q8NGC3 310 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms