RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 KCTD7Q96MP8 289 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 FZD3Q9NPG1 666 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 STMN3Q9NZ72 180 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 GULP1Q9UBP9 304 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 REV1Q9UBZ9 1251 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 ATP6V1HQ9UI12 483 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 SCN8AQ9UQD0 1980 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 PDE4DIPQ5VU43 2346 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 FAM240BA0A1B0GVZ2 78 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 A0A1W2PRB8 838 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 NRG2O14511 850 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 GPR37L1O60883 481 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 RECKO95980 971 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 BCHEP06276 602 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 BNC1Q01954 994 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 CCDC85BQ15834 202 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-203ENST00000374877 OR2G6Q5TZ20 316 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 MED27Q6P2C8 311 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 ARMCX6Q7L4S7 300 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 PDZD3Q86UT5 571 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 LAPTM4BQ86VI4 370 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 OR8J1Q8NGP2 316 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 WDR48Q8TAF3 677 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 REPS1Q96D71 796 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 TCEAL4Q96EI5 215 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 MSLNLQ96KJ4 702 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 RACGAP1Q9H0H5 632 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 NLKQ9UBE8 527 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 B4GALT6Q9UBX8 382 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 HSPB11Q9Y547 144 aa10.53□□□□□ -0.72
CCDC40-203ENST00000374877 A0A1W2PQ72 361 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 EPOPA6NHQ4 379 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 HEPACAM2A8MVW5 462 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 TSC22D2O75157 780 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 FURINP09958 794 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 GJA1P17302 382 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 PBLDP30039 288 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 CTSOP43234 321 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 SPINT3P49223 89 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 GZMKP49863 264 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 PTPN5P54829 565 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 PCBP3P57721 371 aaKnown RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 ILKQ13418 452 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 CEACAM20Q6UY09 585 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 Q8N402 240 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 CLDN22Q8N7P3 220 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF557Q8N988 423 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 FAM181AQ8N9Y4 354 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 GOT1L1Q8NHS2 421 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 SMG7Q92540 1137 aaKnown RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 METTL2AQ96IZ6 378 aaKnown RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 TM9SF2Q99805 663 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 C19orf43Q9BQ61 176 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 SUV39H2Q9H5I1 410 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 TRIM45Q9H8W5 580 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 KCNE2Q9Y6J6 123 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 DSPPQ9NZW4 1301 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 DENND4CQ5VZ89 1909 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF821O75541 412 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 OR2B3O76000 313 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 GSTM1P09488 218 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 ALAS2P22557 587 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 CPN2P22792 545 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 IFNA8P32881 189 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 CD70P32970 193 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 ETV5P41161 510 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 INPP1P49441 399 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 ETV1P50549 477 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 RAB25P57735 213 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 RPS25P62851 125 aaKnown RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 MEF2AQ02078 507 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 LMAN2Q12907 356 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 MPPE1Q53F39 396 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 TYW3Q6IPR3 259 aaKnown RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 GRASPQ7Z6J2 395 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 C11orf74Q86VG3 221 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 RBM45Q8IUH3 476 aaKnown RBP10.52□□□□□ -0.73
CCDC40-203ENST00000374877 TCTE3Q8IZS6 198 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 MMP21Q8N119 569 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 OR52P1PQ8NH57 321 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 TMEM159Q96B96 161 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 MTERF3Q96E29 417 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 LYSMD1Q96S90 227 aa10.52□□□□□ -0.73
CCDC40-203ENST00000374877 PRKYO43930 277 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 CATP04040 527 aaKnown RBP10.51□□□□□ -0.73
CCDC40-203ENST00000374877 KLK1P06870 262 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 MYL12AP19105 171 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 ELAVL4P26378 380 aaKnown RBP10.51□□□□□ -0.73
CCDC40-203ENST00000374877 HLA-DMAP28067 261 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 OR3A3P47888 321 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 CSNK1DP48730 415 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 SNRPD1P62314 119 aaKnown RBP10.51□□□□□ -0.73
CCDC40-203ENST00000374877 REEP3Q6NUK4 255 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 HSDL2Q6YN16 418 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 ZFP41Q8N8Y5 198 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 HCAR2Q8TDS4 363 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 CXorf40BQ96DE9 158 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 KATNB1Q9BVA0 655 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 MIEF1Q9NQG6 463 aa10.51□□□□□ -0.73
CCDC40-203ENST00000374877 SEMA3GQ9NS98 782 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms