RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ZNF451Q9Y4E5 1061 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 PCNX2A6NKB5 2137 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 LMO7DNF2Z398 122 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 RTCAO00442 366 aaKnown RBP14.7□□□□□ -0.06
CCDC40-202ENST00000374876 MAN1A2O60476 641 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 CBFA2T3O75081 653 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 BCAS1O75363 584 aaPredicted RBP14.7□□□□□ -0.06
CCDC40-202ENST00000374876 ACP5P13686 325 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 NR4A1P22736 598 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 KRT20P35900 424 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 MAP2K4P45985 399 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 CLCNKAP51800 687 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 CDH12P55289 794 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 CRB2Q5IJ48 1285 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 FAM180BQ6P0A1 224 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 CCDC81Q6ZN84 652 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 SLC16A12Q6ZSM3 486 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 CCDC71Q8IV32 467 aaPredicted RBP14.7□□□□□ -0.06
CCDC40-202ENST00000374876 SLC30A8Q8IWU4 369 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 SVOPQ8N4V2 548 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 ANKRD53Q8N9V6 530 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 OR52J3Q8NH60 311 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 GPBAR1Q8TDU6 330 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 GEMIN6Q8WXD5 167 aaKnown RBP14.7□□□□□ -0.06
CCDC40-202ENST00000374876 BORCS5Q969J3 196 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 HSPBAP1Q96EW2 488 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 HRASLS5Q96KN8 279 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 KCNC2Q96PR1 638 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 MS4A8Q9BY19 250 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 WASH6PQ9NQA3 447 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 TRNAU1APQ9NX07 287 aaKnown RBP14.7□□□□□ -0.06
CCDC40-202ENST00000374876 WBP11Q9Y2W2 641 aaKnown RBP14.7□□□□□ -0.06
CCDC40-202ENST00000374876 CSNK1G3Q9Y6M4 447 aa14.7□□□□□ -0.06
CCDC40-202ENST00000374876 SH3PXD2BA1X283 911 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 H7BY64 318 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 CAPN5O15484 640 aaPredicted RBP14.69□□□□□ -0.06
CCDC40-202ENST00000374876 TBX6O95947 436 aaPredicted RBP14.69□□□□□ -0.06
CCDC40-202ENST00000374876 ARAFP10398 606 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 PSMB5P28074 263 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 SERPINB1P30740 379 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 ALDH9A1P49189 494 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 DSTNP60981 165 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 TMED1Q13445 227 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 HEPACAMQ14CZ8 416 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 SPCS2Q15005 226 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 GKN2Q86XP6 184 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 RAB42Q8N4Z0 105 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 SLC5A8Q8N695 610 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 FAM46DQ8NEK8 389 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 ABHD11Q8NFV4 315 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 OR4C6Q8NH72 309 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 IPCEF1Q8WWN9 437 aaPredicted RBP14.69□□□□□ -0.06
CCDC40-202ENST00000374876 UBE2FQ969M7 185 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 PRAP1Q96NZ9 151 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 QRFPRQ96P65 431 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 CXorf36Q9H7Y0 433 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 RMI1Q9H9A7 625 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 TBC1D23Q9NUY8 699 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 TMEM184CQ9NVA4 438 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 DLL3Q9NYJ7 618 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 NLGN3Q9NZ94 848 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 SPATA7Q9P0W8 599 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 KCNK6Q9Y257 313 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 PCDHGA6Q9Y5G7 932 aa14.69□□□□□ -0.06
CCDC40-202ENST00000374876 FEZF1A0PJY2 475 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 MRPS14O60783 128 aaKnown RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 CLPXO76031 633 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 FADS2O95864 444 aaKnown RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 MT-ND2P03891 347 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ANXA8P13928 327 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 DDX5P17844 614 aaKnown RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 BSGP35613 385 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ACTR1BP42025 376 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 GSSP48637 474 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 MANFP55145 182 aaKnown RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ACTR1AP61163 376 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 CSNK2BP67870 215 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ILF3Q12906 894 aaKnown RBP eCLIP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 CYP27C1Q4G0S4 372 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 DUS1LQ6P1R4 473 aaKnown RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ZBTB46Q86UZ6 589 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ARMC8Q8IUR7 673 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 P3H2Q8IVL5 708 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ENTHD1Q8IYW4 607 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ADGRF3Q8IZF5 1079 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 NATD1Q8N6N6 113 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 SMYD1Q8NB12 490 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 FAM81AQ8TBF8 368 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 FNDC8Q8TC99 324 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 OR5P2Q8WZ92 322 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 TM4SF18Q96CE8 201 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 RHNO1Q9BSD3 238 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ZNF717Q9BY31 904 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ACSL5Q9ULC5 683 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 SH3GLB1Q9Y371 365 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 FAM32AQ9Y421 112 aaKnown RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 ARHGEF17Q96PE2 2063 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 SPTBN4Q9H254 2564 aa14.68□□□□□ -0.06
CCDC40-202ENST00000374876 GOLGA4Q13439 2230 aaKnown RBP14.68□□□□□ -0.06
CCDC40-202ENST00000374876 KLHL33A6NCF5 533 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms