RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 OTUB2Q96DC9 234 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 ZNF486Q96H40 463 aaPredicted RBP13.59□□□□□ -0.23
LMX1B-202ENST00000373474 PPA2Q9H2U2 334 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 A8MUA0 341 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 C18orf21Q32NC0 220 aaPredicted RBP13.59□□□□□ -0.23
LMX1B-202ENST00000373474 GPR150Q8NGU9 434 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 SULT4A1Q9BR01 284 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 LHPPQ9H008 270 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 GSTO2Q9H4Y5 243 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 PCDHGA8Q9Y5G5 932 aa13.59□□□□□ -0.23
LMX1B-202ENST00000373474 A0A1B0GVI7 797 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 NPIPA5E9PKD4 350 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 SMAD9O15198 467 aaKnown RBP13.58□□□□□ -0.23
LMX1B-202ENST00000373474 DLSTP36957 453 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 ERVPABLB-1P60509 514 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 NFATC3Q12968 1075 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 GK2Q14410 553 aaPredicted RBP13.58□□□□□ -0.23
LMX1B-202ENST00000373474 WDR45BQ5MNZ6 344 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 ANKRD54Q6NXT1 300 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 GTPBP8Q8N3Z3 284 aaPredicted RBP13.58□□□□□ -0.23
LMX1B-202ENST00000373474 NEIL3Q8TAT5 605 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 IGSF21Q96ID5 467 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 C7orf50Q9BRJ6 194 aaKnown RBP13.58□□□□□ -0.23
LMX1B-202ENST00000373474 ZFP57Q9NU63 452 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 C14orf119Q9NWQ9 140 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 NPIPA1Q9UND3 350 aa13.58□□□□□ -0.23
LMX1B-202ENST00000373474 FUOMA2VDF0 154 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 GDI1P31150 447 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 ALDH3B1P43353 468 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 CAV3P56539 151 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 SLC36A3Q495N2 470 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 SERINC5Q86VE9 423 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 SMARCD2Q92925 531 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 IRF7Q92985 503 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 NPLQ9BXD5 320 aaPredicted RBP13.58□□□□□ -0.24
LMX1B-202ENST00000373474 CENPMQ9NSP4 180 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 FBXL12Q9NXK8 326 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 GPRC5BQ9NZH0 403 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 PCDHGA2Q9Y5H1 932 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 MYH15Q9Y2K3 1946 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 SOBPA7XYQ1 873 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 SFTPBP07988 381 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 FGF4P08620 206 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 HCKP08631 526 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 STSP08842 583 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 CTSOP43234 321 aaPredicted RBP13.58□□□□□ -0.24
LMX1B-202ENST00000373474 CAMLGP49069 296 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 TBPL1P62380 186 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 LRRC37A5PQ49AS3 106 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 C2orf27AQ580R0 203 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 RPL13AP3Q6NVV1 102 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 OR2T33Q8NG76 320 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 OR51G2Q8NGK0 314 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 OR14A2Q96R54 314 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 DPYSL5Q9BPU6 564 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF225Q9UK10 706 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 GLOD5A6NK44 160 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 H7BY64 318 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 FOXD2O60548 495 aaPredicted RBP13.58□□□□□ -0.24
LMX1B-202ENST00000373474 SLC16A8O95907 504 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 HOXD12P35452 270 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 PRKXP51817 358 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 POU6F2P78424 691 aaPredicted RBP13.58□□□□□ -0.24
LMX1B-202ENST00000373474 GPM6BQ13491 265 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 LY6G5CQ5SRR4 150 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 ARFGAP1Q8N6T3 406 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 PRAP1Q96NZ9 151 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 NELL2Q99435 816 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 C11orf49Q9H6J7 331 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF226Q9NYT6 803 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 MYH11P35749 1972 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 CRYBG1Q9Y4K1 1723 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 OR6C6A6NF89 314 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 PFKMP08237 780 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 RAB5CP51148 216 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 TLE3Q04726 772 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 FPGSQ05932 587 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 TDGQ13569 410 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 DOC2AQ14183 400 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 NTRK2Q16620 822 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 TMEM69Q5SWH9 247 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 BORAQ6PGQ7 559 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 PRSS48Q7RTY5 328 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 GALNT11Q8NCW6 608 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 BEST4Q8NFU0 473 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 TMEM174Q8WUU8 243 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 ZDHHC7Q9NXF8 308 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 LAMP5Q9UJQ1 280 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 PCDHB14Q9Y5E9 798 aa13.58□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF623O75123 536 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 STC2O76061 302 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 UQCRC1P31930 480 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 PUS10Q3MIT2 529 aaKnown RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 SLC35F1Q5T1Q4 408 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 RANBP10Q6VN20 620 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 TSPYL5Q86VY4 417 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 OR4K14Q8NGD5 310 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 OR8S1Q8NH09 359 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 SUN3Q8TAQ9 357 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 SETD7Q8WTS6 366 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms