RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 COX10Q12887 443 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 C6orf132Q5T0Z8 1188 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 IDNKQ5T6J7 187 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 TANGO2Q6ICL3 276 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 DGLUCYQ7Z3D6 616 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PTOV1Q86YD1 416 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 MARCH9Q86YJ5 346 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GATSQ8NAP1 163 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 NUP43Q8NFH3 380 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR9A2Q8NGT5 310 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 MCCC1Q96RQ3 725 aaPredicted RBP16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 TMPRSS11EQ9UL52 423 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CFL2Q9Y281 166 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SCN2AQ99250 2005 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GREB1Q4ZG55 1949 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 B4DGG1 531 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 HLA-DQA2P01906 255 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SLC9B2Q86UD5 537 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CENPOQ9BU64 300 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SLC3A1Q07837 685 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PLET1Q6UQ28 207 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 LSRQ86X29 649 aaPredicted RBP16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 RASSF5Q8WWW0 418 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 MUL1Q969V5 352 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ZFP3Q96NJ6 502 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 RACGAP1Q9H0H5 632 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 BRF2Q9HAW0 419 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SLC35C2Q9NQQ7 365 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FAM183AA6NL82 134 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PRSS23O95084 383 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FURINP09958 794 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 BMP4P12644 408 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PVRP15151 417 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GGT2P36268 569 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 RBBP4Q09028 425 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ZNF791Q3KP31 576 aaPredicted RBP16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR4C11Q6IEV9 310 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 A0A1B0GVC2 190 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 A6NIN4 97 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 MPZL2O60487 215 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 JRKO75564 520 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FUCA1P04066 466 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ITPKBP27987 946 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CAV3P56539 151 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 RELAQ04206 551 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 C6orf183Q5T699 404 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR51L1Q8NGJ5 315 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SPPL3Q8TCT6 385 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 TBX21Q9UL17 535 aa16.78■□□□□ 0.28
TRAF3IP1-201ENST00000373327 YY2O15391 372 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 VEGFDO43915 354 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SEC14L2O76054 403 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ITGB7P26010 798 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ZNHIT3Q15649 155 aaPredicted RBP16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FRMPD2BQ6IN97 320 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FRMD1Q8N878 549 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FBXO15Q8NCQ5 510 aaPredicted RBP16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR6K6Q8NGW6 343 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 TMEM80Q96HE8 168 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 HSFX1Q9UBD0 423 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 HAT1O14929 419 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 UGDHO60701 494 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SRPRAP08240 638 aaKnown RBP16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CHMP24386 653 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 RORCP51449 518 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR2B6P58173 313 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 QPRTQ15274 297 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SMU1Q2TAY7 513 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CDKL4Q5MAI5 379 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 LRIF1Q5T3J3 769 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 RBM18Q96H35 190 aaKnown RBP16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CAMK1GQ96NX5 476 aa16.77■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CENPXA8MT69 81 aa16.77■□□□□ 0.27
TRAF3IP1-201ENST00000373327 KLF8O95600 359 aaPredicted RBP16.77■□□□□ 0.27
TRAF3IP1-201ENST00000373327 FCHO2Q0JRZ9 810 aa16.77■□□□□ 0.27
TRAF3IP1-201ENST00000373327 WSCD2Q2TBF2 565 aa16.77■□□□□ 0.27
TRAF3IP1-201ENST00000373327 ZNF776Q68DI1 518 aaPredicted RBP16.77■□□□□ 0.27
TRAF3IP1-201ENST00000373327 NIPAL1Q6NVV3 410 aa16.77■□□□□ 0.27
TRAF3IP1-201ENST00000373327 TOX2Q96NM4 488 aa16.77■□□□□ 0.27
TRAF3IP1-201ENST00000373327 INSM2Q96T92 566 aaPredicted RBP16.77■□□□□ 0.27
TRAF3IP1-201ENST00000373327 URADA6NGE7 173 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 NRG2O14511 850 aaPredicted RBP16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 B3GALT2O43825 422 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 RNGTTO60942 597 aaKnown RBP16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 SOX30O94993 753 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 CD83Q01151 205 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 GPR19Q15760 415 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 GGTA1PQ4G0N0 100 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 C8orf82Q6P1X6 216 aaPredicted RBP16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 CCBE1Q6UXH8 406 aaPredicted RBP16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 SPATC1Q76KD6 591 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 TMC8Q8IU68 726 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 CHCHD4Q8N4Q1 142 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 GAL3ST4Q96RP7 486 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 TREX2Q9BQ50 279 aaPredicted RBP16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 SPRTNQ9H040 489 aaPredicted RBP16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 LMAN2LQ9H0V9 348 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 MBNL1Q9NR56 388 aaKnown RBP16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 MSRAQ9UJ68 235 aa16.76■□□□□ 0.27
TRAF3IP1-201ENST00000373327 CSNK1G3Q9Y6M4 447 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms