RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 FUZQ9BT04 418 aa15.52■□□□□ 0.08
SDC4-201ENST00000372733 LINC00597Q9H2U6 94 aa15.52■□□□□ 0.08
SDC4-201ENST00000372733 TRPV5Q9NQA5 729 aa15.52■□□□□ 0.08
SDC4-201ENST00000372733 CTPS2Q9NRF8 586 aa15.52■□□□□ 0.08
SDC4-201ENST00000372733 TESQ9UGI8 421 aaKnown RBP15.52■□□□□ 0.08
SDC4-201ENST00000372733 ITM2BQ9Y287 266 aa15.52■□□□□ 0.08
SDC4-201ENST00000372733 MMP11P24347 488 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 HTR2BP41595 481 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 TAP2Q03519 686 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 GPR19Q15760 415 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 SPDYE7PQ495Y7 208 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 ZNF628Q5EBL2 1059 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 ARSIQ5FYB1 569 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 CFAP206Q8IYR0 622 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 FAM26EQ8N5C1 309 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 SORCS1Q8WY21 1168 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 IL17FQ96PD4 163 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 TEFMQ96QE5 360 aaKnown RBP15.52■□□□□ 0.07
SDC4-201ENST00000372733 GPA33Q99795 319 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 POLDIP3Q9BY77 421 aaKnown RBP15.52■□□□□ 0.07
SDC4-201ENST00000372733 IRF2BPLQ9H1B7 796 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 SEC14L3Q9UDX4 400 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 ALG5Q9Y673 324 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 CLCA3PQ9Y6N3 262 aa15.52■□□□□ 0.07
SDC4-201ENST00000372733 LAMA2P24043 3122 aaKnown RBP15.52■□□□□ 0.07
SDC4-201ENST00000372733 NEDD8-MDP1E9PL57 170 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 HMGN4O00479 90 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 PSKH1P11801 424 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 TIMP2P16035 220 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 MYL12AP19105 171 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 RECQLP46063 649 aaPredicted RBP15.51■□□□□ 0.07
SDC4-201ENST00000372733 KCNJ5P48544 419 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 MANFP55145 182 aaKnown RBP15.51■□□□□ 0.07
SDC4-201ENST00000372733 WNT4P56705 351 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 RAB33AQ14088 237 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 P2RY14Q15391 338 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 CNIH2Q6PI25 160 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 PLET1Q6UQ28 207 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 HSDL2Q6YN16 418 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 RASSF5Q8WWW0 418 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 ZNF354BQ96LW1 612 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 ACAT2Q9BWD1 397 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 SERHL2Q9H4I8 314 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 B3GAT2Q9NPZ5 323 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 A4GNTQ9UNA3 340 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 GPSM3Q9Y4H4 160 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 PDE4DIPQ5VU43 2346 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 A0A0X1KG70 313 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 A0A1W2PRU2 124 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 SLC28A2O43868 658 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 GAS1P54826 345 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 ARPC4P59998 168 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 FABP5Q01469 135 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 BNC1Q01954 994 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 PLK5Q496M5 336 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 TRIQKQ629K1 86 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 ZNF730Q6ZMV8 503 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.51■□□□□ 0.07
SDC4-201ENST00000372733 IKBIPQ70UQ0 350 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 SZRD1Q7Z422 152 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 C6orf120Q7Z4R8 191 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 ZER1Q7Z7L7 766 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 IQCHQ86VS3 1027 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 TCEAL8Q8IYN2 117 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 OR4K5Q8NGD3 323 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 ZFAND1Q8TCF1 268 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 AP2M1Q96CW1 435 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 OTUB1Q96FW1 271 aaPredicted RBP15.51■□□□□ 0.07
SDC4-201ENST00000372733 FBXW2Q9UKT8 454 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 PLAGL1Q9UM63 463 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 ICKQ9UPZ9 632 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 CCL26Q9Y258 94 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 GPR52Q9Y2T5 361 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 SCN5AQ14524 2016 aa15.51■□□□□ 0.07
SDC4-201ENST00000372733 EPHX1P07099 455 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 SLC2A2P11168 524 aaPredicted RBP15.5■□□□□ 0.07
SDC4-201ENST00000372733 SOX18P35713 384 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 SLC7A9P82251 487 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 FAPQ12884 760 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 SYPL1Q16563 259 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 QSOX2Q6ZRP7 698 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 SLC9B2Q86UD5 537 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 IL17RCQ8NAC3 791 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 CYB5D2Q8WUJ1 264 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 DCLRE1CQ96SD1 692 aaKnown RBP15.5■□□□□ 0.07
SDC4-201ENST00000372733 NRTNQ99748 197 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 PLA2G12AQ9BZM1 189 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 ZSCAN32Q9NX65 697 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 SPG21Q9NZD8 308 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 ACAD8Q9UKU7 415 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 SF3B6Q9Y3B4 125 aaKnown RBP15.5■□□□□ 0.07
SDC4-201ENST00000372733 PRAMEF27A3QJZ7 478 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 SMLR1H3BR10 107 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 PLPP1O14494 284 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 PDPK1O15530 556 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 HPGDSO60760 199 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 NCR1O76036 304 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 OR12D1P0DN82 309 aa15.5■□□□□ 0.07
SDC4-201ENST00000372733 NR2F6P10588 404 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms