RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 BLMHQ13867 455 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 ELOAQ14241 798 aaKnown RBP12.95□□□□□ -0.34
PTPRF-202ENST00000372405 HLA-BQ31612 363 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 AMZ1Q400G9 498 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 CYP27C1Q4G0S4 372 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 PEAR1Q5VY43 1037 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-202ENST00000372405 FAM111BQ6SJ93 734 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 OLIG3Q7RTU3 272 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 STK32CQ86UX6 486 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 CARM1Q86X55 608 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 SLC44A2Q8IWA5 706 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-202ENST00000372405 SMYD1Q8NB12 490 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 SAP25Q8TEE9 199 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 COL26A1Q96A83 441 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 NPLQ9BXD5 320 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-202ENST00000372405 RUBCNLQ9H714 662 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 ANKHQ9HCJ1 492 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 C8orf4Q9NR00 106 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 SOHLH2Q9NX45 425 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 RAB23Q9ULC3 237 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 PLCL2Q9UPR0 1127 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 U3KQA8 63 aa12.95□□□□□ -0.34
PTPRF-202ENST00000372405 TMEM221A6NGB7 291 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 H3BMH7 237 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 M0R296 226 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 GNGT2O14610 69 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 EMC8O43402 210 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 CHST10O43529 356 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 ZBTB11O95625 1053 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 SNAP29O95721 258 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 GNAO1P09471 354 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 GPR3P46089 330 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 MAN2A2P49641 1150 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 TXNL4AP83876 142 aaKnown RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 PPP2R2BQ00005 443 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 DAG1Q14118 895 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 DUSP7Q16829 419 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 OR2T5Q6IEZ7 315 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 CEP68Q76N32 757 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 C11orf74Q86VG3 221 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 ZDHHC13Q8IUH4 622 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 SLC30A8Q8IWU4 369 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 NUP43Q8NFH3 380 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 OR56A1Q8NGH5 318 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 OR2T29Q8NH02 315 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 MIPOL1Q8TD10 442 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 XAGE5Q8WWM1 108 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 AHCYL2Q96HN2 611 aaKnown RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 CD180Q99467 661 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 SPRTNQ9H040 489 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 Q9H521 79 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 SOX17Q9H6I2 414 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 SMURF2Q9HAU4 748 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 PDE7BQ9NP56 450 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 NLGN3Q9NZ94 848 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 NTMQ9P121 344 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 TRPC4Q9UBN4 977 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 SUSD2Q9UGT4 822 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 PADI2Q9Y2J8 665 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 KCNE3Q9Y6H6 103 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 PRKACGP22612 351 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 OR1E2P47887 323 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 ALDH3A2P51648 485 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 GTF2A1P52655 376 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 RAB38P57729 211 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 PRR5P85299 388 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 MERTKQ12866 999 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 ISLR2Q6UXK2 745 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 SVOPLQ8N434 492 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 OR5K1Q8NHB7 308 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 DOK4Q8TEW6 326 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 APOBEC4Q8WW27 367 aaKnown RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 ANKRD9Q96BM1 317 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 MOAP1Q96BY2 351 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 ZC3H10Q96K80 434 aaKnown RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 TREX2Q9BQ50 279 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 ADI1Q9BV57 179 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 OSBPL10Q9BXB5 764 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 ANKRD60Q9BZ19 345 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 SMPD3Q9NY59 655 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 NDUFAF4Q9P032 175 aa12.94□□□□□ -0.34
PTPRF-202ENST00000372405 TMEM184BQ9Y519 407 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-202ENST00000372405 MN1Q10571 1320 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-202ENST00000372405 HYKKA2RU49 373 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 FITM1A5D6W6 292 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 MAGEA13PA6NCF6 341 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 VGLL3A8MV65 326 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 PATE3B3GLJ2 98 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 DUX1O43812 170 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 MFN2O95140 757 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 GPR75O95800 540 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 PORP16435 677 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-202ENST00000372405 CD247P20963 164 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 SEPHS1P49903 392 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 KHKP50053 298 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 ITGA1P56199 1179 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 LAPTM4AQ15012 233 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 SLC36A3Q495N2 470 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 ZNF628Q5EBL2 1059 aa12.93□□□□□ -0.34
PTPRF-202ENST00000372405 FHL5Q5TD97 284 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms