RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SOCS6O14544 535 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 EI24O14681 340 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 ARPC2O15144 300 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 NDUFS3O75489 264 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 SEC24DO94855 1032 aaPredicted RBP14.06□□□□□ -0.16
LMO4-201ENST00000370542 CLDN1O95832 211 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 ESR1P03372 595 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 CDH1P12830 882 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 ALAS2P22557 587 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 EEF1B2P24534 225 aaKnown RBP14.06□□□□□ -0.16
LMO4-201ENST00000370542 GSSP48637 474 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 ALDH3A2P51648 485 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 AIMP2Q13155 320 aaKnown RBP14.06□□□□□ -0.16
LMO4-201ENST00000370542 DAG1Q14118 895 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 NEDD8Q15843 81 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 FXNQ16595 210 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 FAM214AQ32MH5 1076 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 PRR30Q53SZ7 412 aaPredicted RBP14.06□□□□□ -0.16
LMO4-201ENST00000370542 MRNIPQ6NTE8 343 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 TTC23LQ6PF05 361 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 RNF44Q7L0R7 432 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 C2orf73Q8N5S3 287 aaPredicted RBP14.06□□□□□ -0.16
LMO4-201ENST00000370542 ZNF555Q8NEP9 628 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 OR2L3Q8NG85 312 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 CHAC2Q8WUX2 184 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 TANKQ92844 425 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 C19orf60Q96EN9 201 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 MFRPQ9BY79 579 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 ATP13A2Q9NQ11 1180 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 AKIP1Q9NQ31 210 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 ENPP5Q9UJA9 477 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 NXT1Q9UKK6 140 aaKnown RBP14.06□□□□□ -0.16
LMO4-201ENST00000370542 VWA7Q9Y334 891 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 IFT52Q9Y366 437 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 HS3ST3B1Q9Y662 390 aa14.06□□□□□ -0.16
LMO4-201ENST00000370542 HEATR5BQ9P2D3 2071 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 OR2A25A4D2G3 310 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 H3BMM5 538 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 M0QX08 132 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 GMNNO75496 209 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 DDAH2O95865 285 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 AHSGP02765 367 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 ALPPP05187 535 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 JUNP05412 331 aaKnown RBP14.05□□□□□ -0.16
LMO4-201ENST00000370542 ZNF182P17025 639 aaPredicted RBP14.05□□□□□ -0.16
LMO4-201ENST00000370542 LBPP18428 481 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 OGNP20774 298 aaKnown RBP14.05□□□□□ -0.16
LMO4-201ENST00000370542 IL12AP29459 219 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 GLRBP48167 497 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 SLC9A5Q14940 896 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 CYP51A1Q16850 503 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 RFX4Q33E94 735 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 SLX4IPQ5VYV7 408 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 SVOPLQ8N434 492 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 MUL1Q969V5 352 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 LRRC58Q96CX6 371 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 SNRNP40Q96DI7 357 aaKnown RBP14.05□□□□□ -0.16
LMO4-201ENST00000370542 OSBPL10Q9BXB5 764 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 EPS8L2Q9H6S3 715 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 USE1Q9NZ43 259 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 KLHL42Q9P2K6 505 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 PCDHGB1Q9Y5G3 927 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 PCDHA9Q9Y5H5 950 aa14.05□□□□□ -0.16
LMO4-201ENST00000370542 IGLV3-12A0A075B6K2 115 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 TCRBV5S2A0A599 114 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 A8MT66 165 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 MASP2O00187 686 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 UGT2B11O75310 529 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 PSIP1O75475 530 aaKnown RBP14.04□□□□□ -0.16
LMO4-201ENST00000370542 PRSS23O95084 383 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 MED26O95402 600 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 GNAO1P09471 354 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 THRBP10828 461 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 CD1EP15812 388 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 CD247P20963 164 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 MATN1P21941 496 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 PSMB5P28074 263 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 CD40LGP29965 261 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 SERPINB1P30740 379 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 BDKRB1P46663 353 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 RAPSNQ13702 412 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 ARHGAP19Q14CB8 494 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 RPS6KA2Q15349 733 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 PHKG1Q16816 387 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 PRTGQ2VWP7 1150 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 FRMPD2BQ6IN97 320 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 FBXO42Q6P3S6 717 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 KIRREL2Q6UWL6 708 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 PRSS48Q7RTY5 328 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 SPPL2CQ8IUH8 684 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 CILP2Q8IUL8 1156 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 RAB42Q8N4Z0 105 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 FBXO15Q8NCQ5 510 aaPredicted RBP14.04□□□□□ -0.16
LMO4-201ENST00000370542 PHF10Q8WUB8 498 aaKnown RBP14.04□□□□□ -0.16
LMO4-201ENST00000370542 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.04□□□□□ -0.16
LMO4-201ENST00000370542 FOPNLQ96NB1 174 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 KCTD14Q9BQ13 255 aaPredicted RBP14.04□□□□□ -0.16
LMO4-201ENST00000370542 SLC29A3Q9BZD2 475 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 ZBTB20Q9HC78 741 aaPredicted RBP14.04□□□□□ -0.16
LMO4-201ENST00000370542 SLC6A20Q9NP91 592 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms