RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 CELA2AP08217 269 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 TACR1P25103 407 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 EPHA3P29320 983 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 NCBP2P52298 156 aaKnown RBP eCLIP12.82□□□□□ -0.367e-8■□□□□ 8.7
SSR4-202ENST00000370085 CLNS1AP54105 237 aaKnown RBP12.82□□□□□ -0.36
SSR4-202ENST00000370085 ARG2P78540 354 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 ACER2Q5QJU3 275 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 HLA-DQA1Q5Y7H0 255 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 IGFL3Q6UXB1 125 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 LINC00696Q6ZRV3 163 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 LARP4Q71RC2 724 aaKnown RBP eCLIP12.82□□□□□ -0.368e-13■■■■□ 22.2
SSR4-202ENST00000370085 CCDC116Q8IYX3 515 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 CLHC1Q8NHS4 586 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 ACTRT2Q8TDY3 377 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 UCN3Q969E3 161 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 CNRIP1Q96F85 164 aaPredicted RBP12.82□□□□□ -0.36
SSR4-202ENST00000370085 ZBED6CLQ96FA7 236 aaPredicted RBP12.82□□□□□ -0.36
SSR4-202ENST00000370085 EGLN2Q96KS0 407 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 DPY30Q9C005 99 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 SEMA4CQ9C0C4 833 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 SLCO1B3Q9NPD5 702 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 GIMAP2Q9UG22 337 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 ERVK-19Q9WJR5 959 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 GOLGA8QA0A0J9YX86 632 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 GOLGA8OA6NCC3 632 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 GOLGA8NF8WBI6 632 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 SCAMP2O15127 329 aaKnown RBP12.81□□□□□ -0.36
SSR4-202ENST00000370085 TROVE2P10155 538 aaKnown RBP eCLIP12.81□□□□□ -0.36
SSR4-202ENST00000370085 G6PDP11413 515 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 IDO1P14902 403 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 SOX11P35716 441 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 GPR143P51810 404 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 CLDN8P56748 225 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 MAP4K2Q12851 820 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 KLRB1Q12918 225 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 PTGR1Q14914 329 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 CEBPEQ15744 281 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 DPY19L1Q2PZI1 675 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 CPTPQ5TA50 214 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 KIF2BQ8N4N8 673 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 ZNF675Q8TD23 568 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 ZNF721Q8TF20 911 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 PSMF1Q92530 271 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 ZNF681Q96N22 645 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 ZBTB18Q99592 522 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 UTP23Q9BRU9 249 aaKnown RBP12.81□□□□□ -0.36
SSR4-202ENST00000370085 RNF32Q9H0A6 362 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 CDCP1Q9H5V8 836 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 PRODH2Q9UF12 536 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 ATP6V1HQ9UI12 483 aa12.81□□□□□ -0.36
SSR4-202ENST00000370085 YARS2Q9Y2Z4 477 aaKnown RBP12.81□□□□□ -0.36
SSR4-202ENST00000370085 HEMK1Q9Y5R4 338 aaPredicted RBP12.81□□□□□ -0.36
SSR4-202ENST00000370085 BOD1L1Q8NFC6 3051 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 COL6A6A6NMZ7 2263 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 MYO1GB0I1T2 1018 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 PRAMEF2O60811 474 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 IGKV3-11P04433 115 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 VIMP08670 466 aaKnown RBP12.8□□□□□ -0.36
SSR4-202ENST00000370085 GPC1P35052 558 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 MANFP55145 182 aaKnown RBP12.8□□□□□ -0.36
SSR4-202ENST00000370085 C21orf58P58505 322 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 RNF4P78317 190 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 IRX1P78414 480 aaPredicted RBP12.8□□□□□ -0.36
SSR4-202ENST00000370085 FUT7Q11130 342 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 PDE7AQ13946 482 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 GSTA3Q16772 222 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 PRICKLE4Q2TBC4 344 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 ZNF750Q32MQ0 723 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 PCSK4Q6UW60 755 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 EPGNQ6UW88 154 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 IGFL2Q6UWQ7 119 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 TMEM156Q8N614 296 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 VPS37AQ8NEZ2 397 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 NUBPLQ8TB37 319 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 THAP3Q8WTV1 239 aaPredicted RBP12.8□□□□□ -0.36
SSR4-202ENST00000370085 HAS2Q92819 552 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 MAELQ96JY0 434 aaKnown RBP12.8□□□□□ -0.36
SSR4-202ENST00000370085 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.8□□□□□ -0.36
SSR4-202ENST00000370085 WDR55Q9H6Y2 383 aaPredicted RBP12.8□□□□□ -0.36
SSR4-202ENST00000370085 TCF7L2Q9NQB0 619 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 ACSS1Q9NUB1 689 aaPredicted RBP12.8□□□□□ -0.36
SSR4-202ENST00000370085 BCAP29Q9UHQ4 241 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 ANAPC2Q9UJX6 822 aa12.8□□□□□ -0.36
SSR4-202ENST00000370085 TNRC6AQ8NDV7 1962 aaKnown RBP12.8□□□□□ -0.36
SSR4-202ENST00000370085 CPAMD8Q8IZJ3 1885 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 C2orf92A0A1B0GVN3 265 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 GABRR3A8MPY1 467 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 UBDO15205 165 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 EDF1O60869 148 aaKnown RBP12.79□□□□□ -0.36
SSR4-202ENST00000370085 COQ9O75208 318 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 IFI6P09912 130 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 MDH1P40925 334 aaKnown RBP12.79□□□□□ -0.36
SSR4-202ENST00000370085 SSR4P51571 173 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 AQP5P55064 265 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 DIO3P55073 304 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 NRG3P56975 720 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 SLC37A1P57057 533 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 MLF1P58340 268 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 STX1BP61266 288 aa12.79□□□□□ -0.36
SSR4-202ENST00000370085 PSPHP78330 225 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms