RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PRDM9Q9NQV7 894 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 ZNF624Q9P2J8 865 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 CACNA1HO95180 2353 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 DHRS12A0PJE2 317 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 ERI2A8K979 691 aaKnown RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 I3L521 148 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 GNB5O14775 395 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 TSPAN4O14817 238 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 SLC16A6O15403 523 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 NUDT21O43809 227 aaKnown RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 SSX4O60224 188 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 KATNA1O75449 491 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 CDK1P06493 297 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 SLC15A1P46059 708 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 CSNK1EP49674 416 aaKnown RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 PSMD4P55036 377 aaKnown RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 RAB14P61106 215 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 STX5Q13190 355 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 COQ5Q5HYK3 327 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 FAM83HQ6ZRV2 1179 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 Q6ZSR6 202 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 NRARPQ7Z6K4 114 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 COMMD7Q86VX2 200 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 PARGQ86W56 976 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 OFCC1Q8IZS5 231 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 ADAMTS17Q8TE56 1095 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 VPS39Q96JC1 886 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 ART5Q96L15 291 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 RNF145Q96MT1 663 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 FCRL3Q96P31 734 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 TM7SF3Q9NS93 570 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 GPR34Q9UPC5 381 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 CRYL1Q9Y2S2 319 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 RAP2CQ9Y3L5 183 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 LYVE1Q9Y5Y7 322 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 ZFHX2Q9C0A1 2572 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 ASH1LQ9NR48 2969 aaKnown RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 A0A1W2PPV9 198 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 LOC390937A0A1W2PQ73 354 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 SLC5A10A0PJK1 596 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 SLC1A7O00341 560 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 NEMP1O14524 444 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 SIGLEC6O43699 453 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 RFPL3O75679 317 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 MED26O95402 600 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 CLEC2LP0C7M8 214 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 FAM157BP0CG42 384 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 EEF1B2P24534 225 aaKnown RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 PTBP1P26599 531 aaKnown RBP eCLIP6.5□□□□□ -1.374e-9■■■■■ 37.3
CSDE1-204ENST00000369530 ISL1P61371 349 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 RAC1P63000 192 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 CSTF3Q12996 717 aaKnown RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 ART3Q13508 389 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 ZNF460Q14592 562 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 BTBD16Q32M84 506 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 LINC00303Q3SY05 128 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 PCID2Q5JVF3 399 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 LRRC66Q68CR7 880 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 C19orf48Q6RUI8 117 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 CHST15Q7LFX5 561 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 RGL4Q8IZJ4 473 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 OR6K2Q8NGY2 324 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 RDH11Q8TC12 318 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 CYGBQ8WWM9 190 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 MBOAT4Q96T53 435 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 CPNE1Q99829 537 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 DPYSL5Q9BPU6 564 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 ZNF251Q9BRH9 671 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 TM6SF2Q9BZW4 377 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 FAM83DQ9H4H8 585 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 SLC2A6Q9UGQ3 507 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 RPS6KA6Q9UK32 745 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 RUVBL2Q9Y230 463 aaKnown RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 RAI2Q9Y5P3 530 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 HRNRQ86YZ3 2850 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 PRSS38A1L453 326 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 OR2A25A4D2G3 310 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 ARGFXA6NJG6 315 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 BBIP1A8MTZ0 92 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 DNASE2O00115 360 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 YY2O15391 372 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 SELENOFO60613 162 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 RAF1P04049 648 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 GSTM5P46439 218 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 MAP2K6P52564 334 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 CLDN2P57739 230 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 BPIFB3P59826 476 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 SLC35A2P78381 396 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 MICBQ29980 383 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 CTU2Q2VPK5 515 aaKnown RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 TCTE1Q5JU00 501 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 COLEC12Q5KU26 742 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 ZNF691Q5VV52 312 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 C5orf46Q6UWT4 87 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 C8orf59Q8N0T1 100 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 TMEM151AQ8N4L1 468 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 YIPF7Q8N8F6 280 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 GTF3AQ92664 365 aaKnown RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 AKAP1Q92667 903 aaKnown RBP eCLIP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 DMRTB1Q96MA1 342 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms