RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 A0A1W2PR77 199 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 ZC3H12DA2A288 527 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 ASPDHA6ND91 283 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 A6NLC8 198 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 B4E171 279 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 FXYD1O00168 92 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 ENTPD5O75356 428 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 TSPAN7P41732 249 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 MEF2AQ02078 507 aaPredicted RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 ZNF763Q0D2J5 394 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 KIR2DS3Q14952 304 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 RBBP5Q15291 538 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 MAPKAPK3Q16644 382 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 FAM174BQ3ZCQ3 159 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 FAM180AQ6UWF9 173 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 MOGAT3Q86VF5 341 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.29□□□□□ -1.08
TPM3-213ENST00000368545 RNF175Q8N4F7 328 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 C1orf52Q8N6N3 182 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 LMNTD1Q8N9Z9 388 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 STT3BQ8TCJ2 826 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 BRIX1Q8TDN6 353 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 ASB9Q96DX5 294 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 TSSK3Q96PN8 268 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 CENPKQ9BS16 269 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 OR10A5Q9H207 317 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 SPNS1Q9H2V7 528 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 SRMSQ9H3Y6 488 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 XKR8Q9H6D3 395 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 RMND5AQ9H871 391 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 TMEM184CQ9NVA4 438 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 AHSPQ9NZD4 102 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 SLAMF8Q9P0V8 285 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 CROCCQ5TZA2 2017 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 TRBC2A0A5B9 178 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 PRICKLE3O43900 615 aaPredicted RBP8.28□□□□□ -1.08
TPM3-213ENST00000368545 PCDH7O60245 1069 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 FKBP6O75344 327 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 ETHE1O95571 254 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 STAMBPO95630 424 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 EML2O95834 649 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 VIPP01282 170 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 CSF2P04141 144 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 AMY1AP04745 511 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 CHRM5P08912 532 aaPredicted RBP8.28□□□□□ -1.08
TPM3-213ENST00000368545 ITPKBP27987 946 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 RPL3P39023 403 aaKnown RBP8.28□□□□□ -1.08
TPM3-213ENST00000368545 CD96P40200 585 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 GSTM5P46439 218 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 SLC7A2P52569 658 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 CEACAM7Q14002 265 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 RAB39AQ14964 217 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 PLCL1Q15111 1095 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 ELOCQ15369 112 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 PAGE3Q5JUK9 113 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 SPANXN4Q5MJ08 99 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 LAYNQ6UX15 382 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 TAF8Q7Z7C8 310 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 DHDDSQ86SQ9 333 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 SLC9B2Q86UD5 537 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 METTL4Q8N3J2 472 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 SDR16C5Q8N3Y7 309 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 ENDOVQ8N8Q3 282 aaKnown RBP8.28□□□□□ -1.08
TPM3-213ENST00000368545 OR2L3Q8NG85 312 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 PRAP1Q96NZ9 151 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 EBPLQ9BY08 206 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 TWSG1Q9GZX9 223 aa8.28□□□□□ -1.08
TPM3-213ENST00000368545 SNRNP200O75643 2136 aaKnown RBP8.28□□□□□ -1.08
TPM3-213ENST00000368545 TLR4O00206 839 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 MT-ND5P03915 603 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 ANXA2P07355 339 aaKnown RBP8.27□□□□□ -1.08
TPM3-213ENST00000368545 DBHP09172 617 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 ANXA4P09525 319 aaPredicted RBP8.27□□□□□ -1.08
TPM3-213ENST00000368545 SLC6A2P23975 617 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 HNRNPH1P31943 449 aaKnown RBP8.27□□□□□ -1.08
TPM3-213ENST00000368545 S100A3P33764 101 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 HPCAL1P37235 193 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 HNRNPFP52597 415 aaKnown RBP8.27□□□□□ -1.08
TPM3-213ENST00000368545 AP2B1P63010 937 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 UBE2IP63279 158 aaKnown RBP8.27□□□□□ -1.08
TPM3-213ENST00000368545 CSNK1G2P78368 415 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 LRRC74AQ0VAA2 488 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 TRAP1Q12931 704 aaKnown RBP8.27□□□□□ -1.08
TPM3-213ENST00000368545 ADNP2Q6IQ32 1131 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 AAGABQ6PD74 315 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 PAGE2Q7Z2X7 111 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 COMMD6Q7Z4G1 85 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 CAMKMTQ7Z624 323 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 ADCK2Q7Z695 626 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 GPR180Q86V85 440 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 GKN2Q86XP6 184 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 CPOQ8IVL8 374 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 RIMKLAQ8IXN7 391 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 KRTCAP2Q8N6L1 136 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 ZNF740Q8NDX6 193 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 OR4E2Q8NGC2 313 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 OR5AN1Q8NGI8 311 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 CLHC1Q8NHS4 586 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 PEX11GQ96HA9 241 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 SLC45A3Q96JT2 553 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms