RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 UBXN7O94888 489 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 PTTG1O95997 202 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 HNRNPA1P09651 372 aaKnown RBP eCLIP11.13□□□□□ -0.63
COPA-202ENST00000368069 GSTT2BP0CG30 244 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 GIMD1P0DJR0 217 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 ZNF24P17028 368 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 VLDLRP98155 873 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 UGT3A2Q3SY77 523 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 NDUFAF5Q5TEU4 345 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 SLC39A5Q6ZMH5 540 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 DPPA4Q7L190 304 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 SHFQ7M4L6 423 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 ASPGQ86U10 573 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 TMEM173Q86WV6 379 aaPredicted RBP11.13□□□□□ -0.63
COPA-202ENST00000368069 CHST4Q8NCG5 386 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 ITPKCQ96DU7 683 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 SLC35C2Q9NQQ7 365 aa11.13□□□□□ -0.63
COPA-202ENST00000368069 A8MUA0 341 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 LATO43561 262 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 B4GALT2O60909 372 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 UPK1BO75841 260 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 CDK1P06493 297 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 PEPDP12955 493 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 TIMP2P16035 220 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 SLC6A6P31641 620 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 MAP2K3P46734 347 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 DAPP51397 102 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 EIF4HQ15056 248 aaKnown RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 GGTA1PQ4G0N0 100 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 KLHL24Q6TFL4 600 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 TRIM46Q7Z4K8 759 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 RTN4RL1Q86UN2 441 aaPredicted RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 Q8N402 240 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 ZNF480Q8WV37 535 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 OR2M4Q96R27 311 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 CPNE5Q9HCH3 593 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 Q9N2J8 555 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 HSPB11Q9Y547 144 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 OR1A2Q9Y585 309 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 CD8B2A6NJW9 211 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 INMT-MINDY4F8WBC2 141 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 IFNA6P05013 189 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 TACSTD2P09758 323 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 CD8BP10966 210 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 CA5AP35218 305 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 SLC9A3P48764 834 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 TAS2R43P59537 309 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 TMEM35AQ53FP2 167 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 LIPIQ6XZB0 460 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 PRR23CQ6ZRP0 262 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 KLHDC8AQ8IYD2 350 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 PJA1Q8NG27 643 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 OR51A7Q8NH64 312 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 CCDC32Q9BV29 185 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 TTYH1Q9H313 450 aaPredicted RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 PNO1Q9NRX1 252 aaKnown RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 UBR3Q6ZT12 1888 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 RHPN2P1A8MT19 583 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 GRXCR1A8MXD5 290 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 TMEM150CB9EJG8 249 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 OR12D2P58182 307 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 HYAL2Q12891 473 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 PLAG1Q6DJT9 500 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 KLBQ86Z14 1044 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 LMNTD1Q8N9Z9 388 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 SLC25A36Q96CQ1 311 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 FAM46AQ96IP4 442 aaKnown RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 METTL2AQ96IZ6 378 aaKnown RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 RAD9AQ99638 391 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 HDHD5Q9BXW7 423 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 MYNNQ9NPC7 610 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 HCN2Q9UL51 889 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 A0A1B0GVT2 93 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 UNC119BA6NIH7 251 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 CD2P06729 351 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 PIGAP37287 484 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 SOX3P41225 446 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 MTNR1AP48039 350 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 RPS21P63220 83 aaKnown RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 HBA1P69905 142 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 POU6F2P78424 691 aaPredicted RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 ADARB1P78563 741 aaKnown RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 SLC7A9P82251 487 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 CST9Q5W186 159 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 DLEU7Q6UYE1 221 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 PARS2Q7L3T8 475 aaKnown RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 DTX3Q8N9I9 347 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 OR6Q1Q8NGQ2 317 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 ADAD1Q96M93 576 aaKnown RBP11.12□□□□□ -0.63
COPA-202ENST00000368069 SLC6A16Q9GZN6 736 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 PELI2Q9HAT8 420 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 PFDN2Q9UHV9 154 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 ASB1Q9Y576 335 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 PCDHGA2Q9Y5H1 932 aa11.12□□□□□ -0.63
COPA-202ENST00000368069 A0A1W2PQU0 124 aa11.11□□□□□ -0.63
COPA-202ENST00000368069 A0A1W2PRQ8 180 aa11.11□□□□□ -0.63
COPA-202ENST00000368069 HEPACAM2A8MVW5 462 aa11.11□□□□□ -0.63
COPA-202ENST00000368069 PIM1P11309 404 aaPredicted RBP11.11□□□□□ -0.63
COPA-202ENST00000368069 DDCP20711 480 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms