RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FBXL6Q8N531 539 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 OR52J3Q8NH60 311 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 SUN3Q8TAQ9 357 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 FKBP10Q96AY3 582 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 NRTNQ99748 197 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 TREX2Q9BQ50 279 aaPredicted RBP13.24□□□□□ -0.29
USF1-202ENST00000368020 TMEM121BQ9BXQ6 578 aaPredicted RBP13.24□□□□□ -0.29
USF1-202ENST00000368020 OR51I1Q9H343 314 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 ERVK-18Q9QC07 812 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 TBC1D29Q9UFV1 150 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 ACAD8Q9UKU7 415 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 LIPT1Q9Y234 373 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 RNF6Q9Y252 685 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 ZNF780BQ9Y6R6 833 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 CACNA1IQ9P0X4 2223 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 A0A0G2JPF8 293 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 PRAMEF25A6NGN4 478 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 HNRNPCL2B2RXH8 293 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 HNRNPCL3B7ZW38 293 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 AGR2O95994 175 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 IGLV3-19P01714 112 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 H1F0P07305 194 aaKnown RBP13.23□□□□□ -0.29
USF1-202ENST00000368020 HNRNPCL4P0DMR1 293 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 ACVR2AP27037 513 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 EPHA2P29317 976 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 BUD31P41223 144 aaPredicted RBP13.23□□□□□ -0.29
USF1-202ENST00000368020 GP2P55259 537 aaKnown RBP13.23□□□□□ -0.29
USF1-202ENST00000368020 RAB15P59190 212 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 RPS26P62854 115 aaKnown RBP13.23□□□□□ -0.29
USF1-202ENST00000368020 TBCEQ15813 527 aaPredicted RBP13.23□□□□□ -0.29
USF1-202ENST00000368020 NDUFA9Q16795 377 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 ZNF829Q3KNS6 432 aaPredicted RBP13.23□□□□□ -0.29
USF1-202ENST00000368020 DCST1Q5T197 706 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 UBE2UQ5VVX9 321 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 SZRD1Q7Z422 152 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 NRROSQ86YC3 692 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 CAMKK1Q8N5S9 505 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 OR8K5Q8NH50 307 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 SGCDQ92629 289 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 BORCS5Q969J3 196 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 SIGLEC11Q96RL6 698 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 TWSG1Q9GZX9 223 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 NAA50Q9GZZ1 169 aaKnown RBP13.23□□□□□ -0.29
USF1-202ENST00000368020 SLC6A17Q9H1V8 727 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 ACOT13Q9NPJ3 140 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 RASSF1Q9NS23 344 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 MS4A12Q9NXJ0 267 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 SPHK1Q9NYA1 384 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 SCHIP1Q9P0W5 487 aaPredicted RBP13.23□□□□□ -0.29
USF1-202ENST00000368020 C5AR2Q9P296 337 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 TRPC4Q9UBN4 977 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 PSORS1C1Q9UIG5 152 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 ENTPD2Q9Y5L3 495 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 LRP4O75096 1905 aa13.23□□□□□ -0.29
USF1-202ENST00000368020 A0A1W2PR48 441 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 CLCA1A8K7I4 914 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 EMC8O43402 210 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 PROM1O43490 865 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 TNFSF14O43557 240 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 CLPXO76031 633 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 INMTO95050 263 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 AIFM1O95831 613 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 MT-ND2P03891 347 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 NR2F6P10588 404 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 NUDT1P36639 197 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 ACTR1BP42025 376 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 SERPINB10P48595 397 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 ACTR1AP61163 376 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 ILF3Q12906 894 aaKnown RBP eCLIP13.22□□□□□ -0.29
USF1-202ENST00000368020 PUM1Q14671 1186 aaKnown RBP eCLIP13.22□□□□□ -0.29
USF1-202ENST00000368020 SUZ12Q15022 739 aaKnown RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 C11orf91Q3C1V1 193 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 RPS26P11Q5JNZ5 115 aaPredicted RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 ASPGQ86U10 573 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 P2RY8Q86VZ1 359 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 CCDC71Q8IV32 467 aaPredicted RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 SLC44A2Q8IWA5 706 aaPredicted RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 DNAJC22Q8N4W6 341 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 AQP11Q8NBQ7 271 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 TSTD1Q8NFU3 115 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 OR4E2Q8NGC2 313 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 C9orf43Q8TAL5 461 aaPredicted RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 APH1BQ8WW43 257 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 RAB8BQ92930 207 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 COL21A1Q96P44 957 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 COPS4Q9BT78 406 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 AICDAQ9GZX7 198 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 KLHL31Q9H511 634 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 NMNAT1Q9HAN9 279 aaPredicted RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 USP36Q9P275 1121 aaKnown RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 ATG4BQ9Y4P1 393 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 NINQ8N4C6 2090 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 GSAPA4D1B5 854 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 OR2A25A4D2G3 310 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 DUXAA6NLW8 204 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 OR5K4A6NMS3 321 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 AXIN1O15169 862 aa13.22□□□□□ -0.29
USF1-202ENST00000368020 ERAL1O75616 437 aaKnown RBP13.22□□□□□ -0.29
USF1-202ENST00000368020 UGT2B17O75795 530 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms