RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 STON2Q8WXE9 905 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 TMEM168Q9H0V1 697 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 DSN1Q9H410 356 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 TAS2R7Q9NYW3 318 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 RP1L1Q8IWN7 2480 aaPredicted RBP11.03□□□□□ -0.64
SYNE1-204ENST00000367248 PEX14O75381 377 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 PRLP01236 227 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 FGF4P08620 206 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 ITGA5P08648 1049 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 DHRS4L1P0CG22 281 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 GALK2Q01415 458 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 NDUFAF5Q5TEU4 345 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 CES4AQ5XG92 561 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 OR52P1PQ8NH57 321 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 BORCS5Q969J3 196 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 DPH2Q9BQC3 489 aaPredicted RBP11.03□□□□□ -0.64
SYNE1-204ENST00000367248 TTYH2Q9BSA4 534 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 MAP3K8P41279 467 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 PRLHRP49683 370 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 IL18R1Q13478 541 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 TYSND1Q2T9J0 566 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 RSPO2Q6UXX9 243 aaPredicted RBP11.03□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF534Q76KX8 674 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 CLECL1Q8IZS7 167 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 YIPF7Q8N8F6 280 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 RAB2BQ8WUD1 216 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 LINC01599Q8WXQ3 324 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 MUTYHQ9UIF7 546 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 VDAC3Q9Y277 283 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 J3QRK9 145 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 PDCD5O14737 125 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 LETMD1Q6P1Q0 360 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 PGBD5Q8N414 524 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 APIPQ96GX9 242 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 TAAR2Q9P1P5 351 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 A0A0J9YY10 115 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 AHCYL1O43865 530 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 GPR37L1O60883 481 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 C1SP09871 688 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 SMAD2Q15796 467 aaKnown RBP11.02□□□□□ -0.64
SYNE1-204ENST00000367248 KLHL26Q53HC5 615 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF101Q8IZC7 436 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 TEX26Q8N6G2 289 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 SLC45A3Q96JT2 553 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 CPNE7Q9UBL6 633 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 LRP5O75197 1615 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 FAM240BA0A1B0GVZ2 78 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 WRBO00258 174 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 AZGP1P25311 298 aaKnown RBP11.02□□□□□ -0.64
SYNE1-204ENST00000367248 PDHA2P29803 388 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 EPHA4P54764 986 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 DCAF12Q5T6F0 453 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 OR5M10Q6IEU7 315 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 PAMR1Q6UXH9 720 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 LARP4Q71RC2 724 aaKnown RBP eCLIP11.02□□□□□ -0.64
SYNE1-204ENST00000367248 LRRC17Q8N6Y2 441 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 HORMAD2Q8N7B1 307 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 NEIL2Q969S2 332 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 ORAI3Q9BRQ5 295 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 TWSG1Q9GZX9 223 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.64
SYNE1-204ENST00000367248 TAF4O00268 1085 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 CSTBP04080 98 aaKnown RBP11.02□□□□□ -0.65
SYNE1-204ENST00000367248 PGCP20142 388 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 RAB25P57735 213 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 TIGD6Q17RP2 521 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 FRS2Q8WU20 508 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 NAT6Q93015 286 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 OR6C1Q96RD1 312 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 POLDIP3Q9BY77 421 aaKnown RBP11.02□□□□□ -0.65
SYNE1-204ENST00000367248 HHATLQ9HCP6 504 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 DNAJC27Q9NZQ0 273 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 SRPK3Q9UPE1 567 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 CTHP32929 405 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 DPP6P42658 865 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 UBE2NP61088 152 aaKnown RBP11.02□□□□□ -0.65
SYNE1-204ENST00000367248 GINS1Q14691 196 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 RBM48Q5RL73 367 aaKnown RBP11.02□□□□□ -0.65
SYNE1-204ENST00000367248 ZNF627Q7L945 461 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 FRMD1Q8N878 549 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 OR56A3Q8NH54 315 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 ZNF480Q8WV37 535 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 TM9SF2Q99805 663 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 PCDHB14Q9Y5E9 798 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 FAM155AB1AL88 458 aaPredicted RBP11.02□□□□□ -0.65
SYNE1-204ENST00000367248 ADORA3P0DMS8 318 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 AOAHP28039 575 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 SGSHP51688 502 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 ZNF283Q8N7M2 679 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 PITHD1Q9GZP4 211 aaPredicted RBP11.02□□□□□ -0.65
SYNE1-204ENST00000367248 IFT46Q9NQC8 304 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 SDR39U1Q9NRG7 319 aaPredicted RBP11.02□□□□□ -0.65
SYNE1-204ENST00000367248 IGLV3-10A0A075B6K4 115 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 HCKP08631 526 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 ZNF888P0CJ79 500 aaPredicted RBP11.02□□□□□ -0.65
SYNE1-204ENST00000367248 ZNF16P17020 682 aaPredicted RBP11.02□□□□□ -0.65
SYNE1-204ENST00000367248 MRPL58Q14197 206 aaKnown RBP11.02□□□□□ -0.65
SYNE1-204ENST00000367248 KIAA1614Q5VZ46 1190 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 ARL9Q6T311 187 aa11.02□□□□□ -0.65
SYNE1-204ENST00000367248 DNAAF1Q8NEP3 725 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms