RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CES4AQ5XG92 561 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 FRG2Q64ET8 278 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 GALNT12Q8IXK2 581 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 TP53INP1Q96A56 240 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 JSRP1Q96MG2 331 aaPredicted RBP13.66□□□□□ -0.22
CTSD-202ENST00000367196 GPR78Q96P69 363 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 FRG2BQ96QU4 278 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 SECISBP2Q96T21 854 aaKnown RBP13.66□□□□□ -0.22
CTSD-202ENST00000367196 ZNF559Q9BR84 538 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 DOHHQ9BU89 302 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 NTMT1Q9BV86 223 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 ELOVL6Q9H5J4 265 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 ACKR4Q9NPB9 350 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 NINJ2Q9NZG7 142 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 ITGB1BP2Q9UKP3 347 aa13.66□□□□□ -0.22
CTSD-202ENST00000367196 CHCHD2Q9Y6H1 151 aaPredicted RBP13.66□□□□□ -0.22
CTSD-202ENST00000367196 DCHS2Q6V1P9 2916 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 ANKRD33BA6NCL7 494 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 GOLGA6L10A6NI86 522 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 GLOD5A6NK44 160 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 HRKO00198 91 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 CDH16O75309 829 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 SIX3O95343 332 aaPredicted RBP13.65□□□□□ -0.22
CTSD-202ENST00000367196 CELA3AP09093 270 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 COL6A2P12110 1019 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 SF3B4Q15427 424 aaKnown RBP eCLIP13.65□□□□□ -0.222e-6■■■■□ 21.3
CTSD-202ENST00000367196 WHAMMP3Q1A5X7 153 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 GGTA1PQ4G0N0 100 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 TMEM198Q66K66 360 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 LYPD8Q6UX82 237 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 DGAT2L6Q6ZPD8 337 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 CCDC71Q8IV32 467 aaPredicted RBP13.65□□□□□ -0.22
CTSD-202ENST00000367196 DMRTC2Q8IXT2 367 aaPredicted RBP13.65□□□□□ -0.22
CTSD-202ENST00000367196 LRRC25Q8N386 305 aaPredicted RBP13.65□□□□□ -0.22
CTSD-202ENST00000367196 OR10G3Q8NGC4 313 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 NEIL3Q8TAT5 605 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 SLC44A1Q8WWI5 657 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 DIO2Q92813 273 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 ISL2Q96A47 359 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 PHF21BQ96EK2 531 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 LRRC46Q96FV0 321 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 LRRC1Q9BTT6 524 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 FUT8Q9BYC5 575 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 UCK2Q9BZX2 261 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 CXorf21Q9HAI6 301 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 NPDC1Q9NQX5 325 aaPredicted RBP13.65□□□□□ -0.22
CTSD-202ENST00000367196 NMRK1Q9NWW6 199 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 CFL2Q9Y281 166 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 FAM215AQ9Y5M1 114 aa13.65□□□□□ -0.22
CTSD-202ENST00000367196 LRRC14BA6NHZ5 514 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 OR7A17O14581 309 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 SNX4O95219 450 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 OTCP00480 354 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 GLI4P10075 376 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 KRT15P19012 456 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 POU3F2P20265 443 aaPredicted RBP13.64□□□□□ -0.23
CTSD-202ENST00000367196 GDF1P27539 372 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 NR0B1P51843 470 aaKnown RBP13.64□□□□□ -0.23
CTSD-202ENST00000367196 NEK2P51955 445 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 MYBPHQ13203 477 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 RIPPLY2Q5TAB7 128 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 ADGRD1Q6QNK2 874 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 TMEM200AQ86VY9 491 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 C17orf47Q8NEP4 570 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 OR7G1Q8NGA0 311 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 OR4K14Q8NGD5 310 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 OR52B6Q8NGF0 335 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 CDK15Q96Q40 435 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 FMO2Q99518 471 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 SEMA4BQ9NPR2 832 aaPredicted RBP13.64□□□□□ -0.23
CTSD-202ENST00000367196 ALKBH4Q9NXW9 302 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 XPR1Q9UBH6 696 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 PCTPQ9UKL6 214 aa13.64□□□□□ -0.23
CTSD-202ENST00000367196 CNOT11Q9UKZ1 510 aaKnown RBP13.64□□□□□ -0.23
CTSD-202ENST00000367196 C1orf226A1L170 272 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 LRRC3CA6NJW4 275 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 HSPB2A8KAH6 182 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 ACSL3O95573 720 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 KLK1P06870 262 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 CPMP14384 443 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 DEKP35659 375 aaKnown RBP13.63□□□□□ -0.23
CTSD-202ENST00000367196 MAGEA12P43365 314 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 MASP1P48740 699 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 MAPK12P53778 367 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 FUT7Q11130 342 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 HSPB2Q16082 182 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 CCNYL2Q5T2Q4 361 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 MILR1Q7Z6M3 343 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 PACS2Q86VP3 889 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 PM20D2Q8IYS1 436 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 C17orf53Q8N3J3 647 aaPredicted RBP13.63□□□□□ -0.23
CTSD-202ENST00000367196 ZNF441Q8N8Z8 693 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 MNS1Q8NEH6 495 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 TRPC4APQ8TEL6 797 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 PAFAH2Q99487 392 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 MRPL57Q9BQC6 102 aaKnown RBP13.63□□□□□ -0.23
CTSD-202ENST00000367196 OR10A5Q9H207 317 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 MRPL46Q9H2W6 279 aaKnown RBP13.63□□□□□ -0.23
CTSD-202ENST00000367196 CDC42EP4Q9H3Q1 356 aaKnown RBP13.63□□□□□ -0.23
CTSD-202ENST00000367196 TNFRSF10DQ9UBN6 386 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms