RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 UNC5DQ6UXZ4 953 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 LAPTM4BQ86VI4 370 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 TIGD4Q8IY51 512 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 RASGEF1AQ8N9B8 481 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 C19orf18Q8NEA5 215 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 OR8J1Q8NGP2 316 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 BTN2A2Q8WVV5 523 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 MTERF3Q96E29 417 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 KCTD7Q96MP8 289 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 WACQ9BTA9 647 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 COQ3Q9NZJ6 369 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 MAT2BQ9NZL9 334 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 TAAR2Q9P1P5 351 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 SHISA3A0PJX4 238 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 CASKO14936 926 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 PSIP1O75475 530 aaKnown RBP12.88□□□□□ -0.35
PRKN-205ENST00000366897 SLCO2B1O94956 709 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 CATP04040 527 aaKnown RBP12.88□□□□□ -0.35
PRKN-205ENST00000366897 H1F0P07305 194 aaKnown RBP12.88□□□□□ -0.35
PRKN-205ENST00000366897 SLC9A3P48764 834 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 GZMKP49863 264 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 CTBP2P56545 445 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 GOT1L1Q8NHS2 421 aaPredicted RBP12.88□□□□□ -0.35
PRKN-205ENST00000366897 ZFAND1Q8TCF1 268 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 MSLNLQ96KJ4 702 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 IL17FQ96PD4 163 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 LYSMD1Q96S90 227 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 TMED9Q9BVK6 235 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 ANKRA2Q9H9E1 313 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 TBC1D17Q9HA65 648 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 HCN2Q9UL51 889 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 C2orf92A0A1B0GVN3 265 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 WASHC1A8K0Z3 465 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 ANHXE9PGG2 379 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 NPC1O15118 1278 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 SLC16A5O15375 505 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 B4GALT2O60909 372 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 NME6O75414 186 aaPredicted RBP12.87□□□□□ -0.35
PRKN-205ENST00000366897 SCO1O75880 301 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 OR2B3O76000 313 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 LALBAP00709 142 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 CYP2A6P11509 494 aaPredicted RBP12.87□□□□□ -0.35
PRKN-205ENST00000366897 HLA-FP30511 346 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 OR3A3P47888 321 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 DGKGP49619 791 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 WSCD2Q2TBF2 565 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 C12orf73Q69YU5 71 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 WASH2PQ6VEQ5 465 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 ZNF366Q8N895 744 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 PCSK9Q8NBP7 692 aaKnown RBP12.87□□□□□ -0.35
PRKN-205ENST00000366897 TMEM145Q8NBT3 493 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 UCN3Q969E3 161 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 PLA2G12AQ9BZM1 189 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 EGLN3Q9H6Z9 239 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 TRIM45Q9H8W5 580 aaPredicted RBP12.87□□□□□ -0.35
PRKN-205ENST00000366897 KCNK12Q9HB15 430 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 DMRT3Q9NQL9 472 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 KLHL42Q9P2K6 505 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 KCND3Q9UK17 655 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 PLAGL1Q9UM63 463 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 NUMA1Q14980 2115 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 A0A0G2JN53 185 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 PIPSLA2A3N6 862 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 ISM1B1AKI9 464 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 CH25HO95992 272 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 IL1AP01583 271 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 TRAPPC2P0DI81 140 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 TRAPPC2BP0DI82 140 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 NPPBP16860 134 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 WDR5P61964 334 aaKnown RBP12.87□□□□□ -0.35
PRKN-205ENST00000366897 SNAPC1Q16533 368 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 SPDYE7PQ495Y7 208 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 CLEC12AQ5QGZ9 265 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 LAMTOR1Q6IAA8 161 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 FAM71E1Q6IPT2 247 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 SDE2Q6IQ49 451 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 PODNL1Q6PEZ8 512 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 GDPGP1Q6ZNW5 385 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 SLC30A8Q8IWU4 369 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 GDPD1Q8N9F7 314 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 OR5D16Q8NGK9 328 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 C2orf15Q8WU43 125 aaKnown RBP12.87□□□□□ -0.35
PRKN-205ENST00000366897 APOBEC4Q8WW27 367 aaKnown RBP12.87□□□□□ -0.35
PRKN-205ENST00000366897 SORCS1Q8WY21 1168 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 SLC9A6Q92581 669 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 TRIM63Q969Q1 353 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 MAP6Q96JE9 813 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 ZNF717Q9BY31 904 aaPredicted RBP12.87□□□□□ -0.35
PRKN-205ENST00000366897 NLNQ9BYT8 704 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 STARD7Q9NQZ5 370 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 GULP1Q9UBP9 304 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 SLC23A1Q9UHI7 598 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 ENOPH1Q9UHY7 261 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 MAPRE3Q9UPY8 281 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 DNAH14Q0VDD8 3507 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 A8MVJ9 347 aa12.87□□□□□ -0.35
PRKN-205ENST00000366897 TP53P04637 393 aaPredicted RBP12.87□□□□□ -0.35
PRKN-205ENST00000366897 RPLP2P05387 115 aaKnown RBP12.87□□□□□ -0.35
PRKN-205ENST00000366897 URODP06132 367 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms