RNA–Protein interactions for RNA: ENST00000366170.6

VSTM1-202, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-202ENST00000366170 FAM117AQ9C073 453 aa12.15□□□□□ -0.46
VSTM1-202ENST00000366170 PAIP1Q9H074 479 aaKnown RBP12.15□□□□□ -0.46
VSTM1-202ENST00000366170 NDE1Q9NXR1 346 aa12.15□□□□□ -0.46
VSTM1-202ENST00000366170 C19orf25Q9UFG5 118 aaPredicted RBP12.15□□□□□ -0.46
VSTM1-202ENST00000366170 KCND3Q9UK17 655 aa12.15□□□□□ -0.46
VSTM1-202ENST00000366170 ACSL6Q9UKU0 697 aa12.15□□□□□ -0.46
VSTM1-202ENST00000366170 NEUROG3Q9Y4Z2 214 aa12.15□□□□□ -0.46
VSTM1-202ENST00000366170 PCDHB14Q9Y5E9 798 aa12.15□□□□□ -0.46
VSTM1-202ENST00000366170 CLCA3PQ9Y6N3 262 aa12.15□□□□□ -0.46
VSTM1-202ENST00000366170 NUP210LQ5VU65 1888 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 IGKV3D-11A0A0A0MRZ8 115 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 ERICH4A6NGS2 130 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 EVPLLA8MZ36 301 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 GYG2O15488 501 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 EMC8O43402 210 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 KLF7O75840 302 aaPredicted RBP12.14□□□□□ -0.47
VSTM1-202ENST00000366170 ZCCHC18P0CG32 403 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 PTPN4P29074 926 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 PTGER1P34995 402 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 CHI3L1P36222 383 aaPredicted RBP12.14□□□□□ -0.47
VSTM1-202ENST00000366170 PRKAG1P54619 331 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 SLC25A3Q00325 362 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 MAP4K2Q12851 820 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 CAPRIN1Q14444 709 aaKnown RBP12.14□□□□□ -0.47
VSTM1-202ENST00000366170 ZNF267Q14586 743 aaPredicted RBP12.14□□□□□ -0.47
VSTM1-202ENST00000366170 SSPNQ14714 243 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 PRICKLE4Q2TBC4 344 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 TRMT5Q32P41 509 aaKnown RBP12.14□□□□□ -0.47
VSTM1-202ENST00000366170 LACTB2Q53H82 288 aaPredicted RBP12.14□□□□□ -0.47
VSTM1-202ENST00000366170 LRIF1Q5T3J3 769 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 TMEM107Q6UX40 140 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 ANKRD37Q7Z713 158 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 ELP4Q96EB1 424 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 PHF12Q96QT6 1004 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 CGREF1Q99674 301 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 SH3GL1Q99961 368 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 BTBD10Q9BSF8 475 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 CXorf36Q9H7Y0 433 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 NEUROD4Q9HD90 331 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 TAS2R1Q9NYW7 299 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 TCFL5Q9UL49 500 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 ERVK-11Q9UQG0 969 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 MSRB2Q9Y3D2 182 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 CLDN16Q9Y5I7 305 aa12.14□□□□□ -0.47
VSTM1-202ENST00000366170 C17orf105B2RV13 164 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 CLIC1O00299 241 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 PLOD2O00469 737 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 PCDH17O14917 1159 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 SLITRK5O94991 958 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 KRT75O95678 551 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 LIPCP11150 499 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 PGDP52209 483 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 EFNA3P52797 238 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 PSME3P61289 254 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 RPS18P62269 152 aaKnown RBP12.13□□□□□ -0.47
VSTM1-202ENST00000366170 PRR5P85299 388 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 TGIF1Q15583 401 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 ELAVL1Q15717 326 aaKnown RBP12.13□□□□□ -0.47
VSTM1-202ENST00000366170 GTDC1Q4AE62 458 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 TRMT12Q53H54 448 aaKnown RBP12.13□□□□□ -0.47
VSTM1-202ENST00000366170 SFT2D3Q587I9 215 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 RUNDC3AQ59EK9 446 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 ZNF628Q5EBL2 1059 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 FAM69BQ5VUD6 431 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 CPZQ66K79 652 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 NANOGP8Q6NSW7 305 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 BHLHB9Q6PI77 547 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 TMEM205Q6UW68 189 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 DGAT2L6Q6ZPD8 337 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 LANCL3Q6ZV70 420 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 ZNF771Q7L3S4 317 aaPredicted RBP12.13□□□□□ -0.47
VSTM1-202ENST00000366170 SZRD1Q7Z422 152 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 C6orf120Q7Z4R8 191 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 CPEB2Q7Z5Q1 589 aaKnown RBP12.13□□□□□ -0.47
VSTM1-202ENST00000366170 DTX1Q86Y01 620 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 GALNT12Q8IXK2 581 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 CLEC4FQ8N1N0 589 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 RBM15BQ8NDT2 890 aaKnown RBP12.13□□□□□ -0.47
VSTM1-202ENST00000366170 NUP43Q8NFH3 380 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 FBXO27Q8NI29 283 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 PSMA8Q8TAA3 256 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 ZNF675Q8TD23 568 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 DAZLQ92904 295 aaKnown RBP12.13□□□□□ -0.47
VSTM1-202ENST00000366170 MOAP1Q96BY2 351 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 VPS50Q96JG6 964 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 ANKRD27Q96NW4 1050 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 SLC35A5Q9BS91 424 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 EFHD1Q9BUP0 239 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 THUMPD3Q9BV44 507 aaKnown RBP12.13□□□□□ -0.47
VSTM1-202ENST00000366170 C1orf21Q9H246 121 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 NANOGQ9H9S0 305 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 GPN2Q9H9Y4 310 aaPredicted RBP12.13□□□□□ -0.47
VSTM1-202ENST00000366170 CXorf21Q9HAI6 301 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 ADAP2Q9NPF8 381 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 ZCCHC3Q9NUD5 404 aaKnown RBP12.13□□□□□ -0.47
VSTM1-202ENST00000366170 MAT2BQ9NZL9 334 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 VAPAQ9P0L0 249 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 PTGFRNQ9P2B2 879 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 BCAP29Q9UHQ4 241 aa12.13□□□□□ -0.47
VSTM1-202ENST00000366170 L3MBTL1Q9Y468 752 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms