RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 LRRC49Q8IUZ0 686 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 TMEM185AQ8NFB2 350 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 FBXO25Q8TCJ0 367 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 P3H4Q92791 437 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 NAP1L3Q99457 506 aaPredicted RBP3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 RPP25Q9BUL9 199 aaKnown RBP3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 THAP9Q9H5L6 903 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 DCTPP1Q9H773 170 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 PRMT8Q9NR22 394 aaPredicted RBP3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 DHRS4-AS1Q9P1J3 65 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 VPS54Q9P1Q0 977 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 FAM153AQ9UHL3 310 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 IKZF3Q9UKT9 509 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 MRPL11Q9Y3B7 192 aaKnown RBP3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 PTPRUQ92729 1446 aa3.34□□□□□ -1.88
RNU6-560P-201ENST00000364007 A0A087WWV3 80 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZNF840PA6NDX5 716 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 FOXI3A8MTJ6 420 aaPredicted RBP3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 RNF212BA8MTL3 300 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 LRP3O75074 770 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 HPP00738 406 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 OAS1P00973 400 aaKnown RBP3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 GP9P14770 177 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZNF18P17022 549 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 CCZ1BP86790 482 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 CCZ1P86791 482 aaPredicted RBP3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 PPP1R8Q12972 351 aaKnown RBP3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 TSTA3Q13630 321 aaPredicted RBP3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 CLPPQ16740 277 aaPredicted RBP3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 C17orf58Q2M2W7 97 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 ANKRD55Q3KP44 614 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 HIST2H2AA3Q6FI13 130 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 DLEU7Q6UYE1 221 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 C1orf186Q6ZWK4 172 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 GPR142Q7Z601 462 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 RABEPKQ7Z6M1 372 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 SUMF1Q8NBK3 374 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 CCNYQ8ND76 341 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 OR6T1Q8NGN1 323 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 EXOC6Q8TAG9 804 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 KIAA1524Q8TCG1 905 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 URGCPQ8TCY9 931 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 EEF2KMTQ96G04 330 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 C1orf147Q96MC9 270 aaPredicted RBP3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 TEX13AQ9BXU3 409 aaPredicted RBP3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 TRPV6Q9H1D0 765 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 TNMDQ9H2S6 317 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 Q9HAA7 133 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 ADGRL4Q9HBW9 690 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 ERVK-18Q9QC07 812 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 TSPAN16Q9UKR8 245 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 STRAPQ9Y3F4 350 aaKnown RBP3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 MMP24Q9Y5R2 645 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 FAM205AQ6ZU69 1335 aa3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 COL2A1P02458 1487 aaPredicted RBP3.33□□□□□ -1.88
RNU6-560P-201ENST00000364007 A0A0U1RRA0 63 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 CHEK1O14757 476 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 GPRIN2O60269 458 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 NME2P1O60361 137 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 HSF2BPO75031 334 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 SH3BGRLO75368 114 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 BCAS2O75934 225 aaPredicted RBP3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 MT-ND3P03897 115 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 FCGR3AP08637 254 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 SERPINF2P08697 491 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 FAM200BP0CF97 657 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 VDRP11473 427 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 MARCKSP29966 332 aaPredicted RBP3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 HMGCLP35914 325 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ELK3P41970 407 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 NT5C2P49902 561 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 SLC12A3P55017 1021 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 GSTO1P78417 241 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 CDKL1Q00532 357 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ABRAXAS2Q15018 415 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ZNF239Q16600 458 aaKnown RBP3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 HKDC1Q2TB90 917 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 DDI2Q5TDH0 399 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 FAM219BQ5XKK7 198 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 REP15Q6BDI9 236 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 SPINK14Q6IE38 97 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ETFRF1Q6IPR1 90 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 PLBD1Q6P4A8 553 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ASRGL1Q7L266 308 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ADGRD2Q7Z7M1 963 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 P2RY8Q86VZ1 359 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 HPS6Q86YV9 775 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 LYG1Q8N1E2 194 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 OR52E1Q8NGJ3 308 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 FLVCR1-AS1Q8TAF5 88 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 RDH11Q8TC12 318 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 DEFB118Q96PH6 123 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ACCSQ96QU6 501 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 PSMB7Q99436 277 aa3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 RNF41Q9H4P4 317 aaPredicted RBP3.32□□□□□ -1.88
RNU6-560P-201ENST00000364007 ELL3Q9HB65 397 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms