RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 WDR5P61964 334 aaKnown RBP15.55■□□□□ 0.08
SCAF1-201ENST00000360565 ADAM15Q13444 863 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 HNRNPA1L2Q32P51 320 aaKnown RBP15.55■□□□□ 0.08
SCAF1-201ENST00000360565 TMEM35AQ53FP2 167 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 TOMM5Q8N4H5 51 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 BADQ92934 168 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 SH3YL1Q96HL8 342 aaPredicted RBP15.55■□□□□ 0.08
SCAF1-201ENST00000360565 EPYCQ99645 322 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 GSDMCQ9BYG8 508 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 OR51E2Q9H255 320 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 MVB12BQ9H7P6 319 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 PPIEQ9UNP9 301 aaKnown RBP15.55■□□□□ 0.08
SCAF1-201ENST00000360565 WASH3PC4AMC7 463 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 CD2P06729 351 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 F8A1P23610 371 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 RUNX3Q13761 415 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 ZNF181Q2M3W8 571 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 MLIPQ5VWP3 458 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 PLEKHG7Q6ZR37 379 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 SNX29P2Q8IUI4 249 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 METTL2AQ96IZ6 378 aaKnown RBP15.55■□□□□ 0.08
SCAF1-201ENST00000360565 ZFR2Q9UPR6 939 aaKnown RBP15.55■□□□□ 0.08
SCAF1-201ENST00000360565 COL5A3P25940 1745 aaPredicted RBP15.55■□□□□ 0.08
SCAF1-201ENST00000360565 TTC3P53804 2025 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 PCDHGA12O60330 932 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 JRKO75564 520 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 KLHL18O94889 574 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 MT-ND5P03915 603 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 YES1P07947 543 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 ZNF267Q14586 743 aaPredicted RBP15.55■□□□□ 0.08
SCAF1-201ENST00000360565 SPCS2Q15005 226 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 SHFQ7M4L6 423 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 B3GNT8Q7Z7M8 397 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 AMIGO1Q86WK6 493 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 HDHD5Q9BXW7 423 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 HSFX1Q9UBD0 423 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 FKBP7Q9Y680 259 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 CACNA1CQ13936 2221 aa15.55■□□□□ 0.08
SCAF1-201ENST00000360565 OR52A4PA6NMU1 304 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 BLOC1S5-TXNDC5H3BN57 136 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 GIMD1P0DJR0 217 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 GABRA3P34903 492 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 C6orf183Q5T699 404 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 PAMR1Q6UXH9 720 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 CHST4Q8NCG5 386 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 GRPEL2Q8TAA5 225 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 CHIAQ9BZP6 476 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 ZBTB20Q9HC78 741 aaPredicted RBP15.54■□□□□ 0.08
SCAF1-201ENST00000360565 COPS7AQ9UBW8 275 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 CCL26Q9Y258 94 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 A0A1B0GTL3 188 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 CDC123O75794 336 aaPredicted RBP15.54■□□□□ 0.08
SCAF1-201ENST00000360565 C1orf105O95561 183 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 ZNF24P17028 368 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 CR2P20023 1033 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 OR12D2P58182 307 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 FOXB2Q5VYV0 432 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 TBPL2Q6SJ96 375 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 PROKR2Q8NFJ6 384 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 METTL21AQ8WXB1 218 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 RPL3LQ92901 407 aaKnown RBP15.54■□□□□ 0.08
SCAF1-201ENST00000360565 WBP2Q969T9 261 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 EFHD2Q96C19 240 aaPredicted RBP15.54■□□□□ 0.08
SCAF1-201ENST00000360565 MACROD1Q9BQ69 325 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 BCL7BQ9BQE9 202 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 TBL1XR1Q9BZK7 514 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 GRXCR1A8MXD5 290 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 FXYD1O00168 92 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 FRS3O43559 492 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 RNGTTO60942 597 aaKnown RBP15.54■□□□□ 0.08
SCAF1-201ENST00000360565 MTNR1AP48039 350 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 POU6F2P78424 691 aaPredicted RBP15.54■□□□□ 0.08
SCAF1-201ENST00000360565 ZNF234Q14588 700 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 NNATQ16517 81 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 FLYWCH1Q4VC44 716 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 DLEU7Q6UYE1 221 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 GALNT12Q8IXK2 581 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 FANK1Q8TC84 345 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 PPP1R14AQ96A00 147 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 CCDC115Q96NT0 180 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 TMEM5Q9Y2B1 443 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 SOBPA7XYQ1 873 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 H3BSH0 61 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 ALDH3B2P48448 385 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 PRLHRP49683 370 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 VSX2P58304 361 aaPredicted RBP15.54■□□□□ 0.08
SCAF1-201ENST00000360565 CXCR4P61073 352 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 PITPNAQ00169 270 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 FRMPD2BQ6IN97 320 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 PEG10Q86TG7 708 aaKnown RBP15.54■□□□□ 0.08
SCAF1-201ENST00000360565 LRRC25Q8N386 305 aaPredicted RBP15.54■□□□□ 0.08
SCAF1-201ENST00000360565 OR5D16Q8NGK9 328 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 PHOSPHO1Q8TCT1 267 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 SLCO4A1Q96BD0 722 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 P2RY12Q9H244 342 aa15.54■□□□□ 0.08
SCAF1-201ENST00000360565 B4GALT3O60512 393 aa15.53■□□□□ 0.08
SCAF1-201ENST00000360565 ECDO95905 644 aaPredicted RBP15.53■□□□□ 0.08
SCAF1-201ENST00000360565 IFNA6P05013 189 aa15.53■□□□□ 0.08
SCAF1-201ENST00000360565 ITGAMP11215 1152 aa15.53■□□□□ 0.08
SCAF1-201ENST00000360565 PORP16435 677 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms