RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 OR2AG2A6NM03 316 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 FABP7O15540 132 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 LZTS3O60299 673 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 SLC22A5O76082 557 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 SLC16A8O95907 504 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 TGFB1P01137 390 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ASGR1P07306 291 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 UQCRC2P22695 453 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 BDKRB1P46663 353 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 CCL23P55773 120 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 RPS26P62854 115 aaKnown RBP9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 RAB40BQ12829 278 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 PLD1Q13393 1074 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 CCSMST1Q4G0I0 132 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 UNC5DQ6UXZ4 953 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 LSMEM1Q8N8F7 131 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ZFP41Q8N8Y5 198 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ZNF431Q8TF32 576 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 LINC01599Q8WXQ3 324 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 NEIL2Q969S2 332 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 TMEM159Q96B96 161 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 OTULINQ96BN8 352 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 RNFT2Q96EX2 444 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 PDXPQ96GD0 296 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 KCNJ15Q99712 375 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ATF6BQ99941 703 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 MED28Q9H204 178 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 PPIL3Q9H2H8 161 aaKnown RBP9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 OR51B5Q9H339 312 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 PIGUQ9H490 435 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 SLC28A3Q9HAS3 691 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 MYNNQ9NPC7 610 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ISYNA1Q9NPH2 558 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 CREBZFQ9NS37 354 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 MARCH5Q9NX47 278 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ZSCAN32Q9NX65 697 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 NCKAP1Q9Y2A7 1128 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 CDH10Q9Y6N8 788 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 KIAA1671Q9BY89 1806 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ANKDD1BA6NHY2 528 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 NCR1O76036 304 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 SLCO2B1O94956 709 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 PDGFAP04085 211 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ACP2P11117 423 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 SPINT3P49223 89 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ATP12AP54707 1039 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 PER3P56645 1201 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 SNRPD1P62314 119 aaKnown RBP9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ALDH6A1Q02252 535 aaKnown RBP9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ELAVL2Q12926 359 aaKnown RBP9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 LRRC73Q5JTD7 316 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 IER5LQ5T953 404 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 FAM205BPQ63HN1 556 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 FAM71E1Q6IPT2 247 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 TIGD4Q8IY51 512 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 GPR32P1Q8NGA4 272 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 WDR48Q8TAF3 677 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 SLC7A13Q8TCU3 470 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 SLC38A5Q8WUX1 472 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 UPF1Q92900 1129 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■■□□ 14.7
TRAPPC2-201ENST00000359680 FOXJ1Q92949 421 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 CCDC120Q96HB5 630 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 TMEM19Q96HH6 336 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 NT5DC2Q9H857 520 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 MRPL39Q9NYK5 338 aaKnown RBP9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 EIF3KQ9UBQ5 218 aaKnown RBP9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 CLCA2Q9UQC9 943 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 EXOSC1Q9Y3B2 195 aaKnown RBP9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 ASB4Q9Y574 426 aa9.42□□□□□ -0.9
TRAPPC2-201ENST00000359680 TRDV1A0A1B0GX56 115 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 LINC00862A6NCI5 91 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 I3L521 148 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 ADAM12O43184 909 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 SEMA7AO75326 666 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 SOD1P00441 154 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 KLK1P06870 262 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 IMPA1P29218 277 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 GIPRP48546 466 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 BTG1P62324 171 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 CSTF1Q05048 431 aaKnown RBP9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 COX10Q12887 443 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 RIN1Q13671 783 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 SLBPQ14493 270 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 NDUFA9Q16795 377 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 DUSP6Q16828 381 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 FAM26DQ5JW98 314 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 SLC25A30Q5SVS4 291 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 ACSM5Q6NUN0 579 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 SLCO4C1Q6ZQN7 724 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 MARCH9Q86YJ5 346 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 RBM45Q8IUH3 476 aaKnown RBP9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 HORMAD2Q8N7B1 307 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 OR4M2Q8NGB6 313 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 OR56A3Q8NH54 315 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 NEIL3Q8TAT5 605 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 ZNF354BQ96LW1 612 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 TMED9Q9BVK6 235 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 SUV39H2Q9H5I1 410 aa9.41□□□□□ -0.9
TRAPPC2-201ENST00000359680 TBC1D17Q9HA65 648 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms