RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 NMNAT1Q9HAN9 279 aaPredicted RBP12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 EQTNQ9NQ60 294 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 MCM3APO60318 1980 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 HEPACAM2A8MVW5 462 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 LOC730098B7Z3J9 87 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 PRRG1O14668 218 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 LRRTM2O43300 516 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 GADD45GO95257 159 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 PIRTP0C851 137 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 OSMP13725 252 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 KCNJ5P48544 419 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 GRIN2CQ14957 1233 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 SLC36A2Q495M3 483 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 RAB11FIP2Q7L804 512 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 TRMT11Q7Z4G4 463 aaKnown RBP12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 LRRC28Q86X40 367 aaPredicted RBP12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 NAXDQ8IW45 347 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 UMODL1-AS1Q8N2C9 162 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 OR5M3Q8NGP4 307 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 MAL2Q969L2 176 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 CHFRQ96EP1 664 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 OR4K3Q96R72 315 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 DDOQ99489 341 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 ACTR6Q9GZN1 396 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 RNF32Q9H0A6 362 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 ZNF624Q9P2J8 865 aaPredicted RBP12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 CORO2BQ9UQ03 480 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 COMMD10Q9Y6G5 202 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 TMEM129A0AVI4 362 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 ANXA2P2A6NMY6 339 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 J3KTA2 159 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 SGCEO43556 437 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 EIF3GO75821 320 aaKnown RBP eCLIP12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 ZNF865P0CJ78 1059 aaPredicted RBP12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 PRPS1L1P21108 318 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 CDKN1CP49918 316 aaPredicted RBP12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 HEPACAMQ14CZ8 416 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 CASP12Q6UXS9 341 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 UNC5DQ6UXZ4 953 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 MACC1Q6ZN28 852 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 C11orf65Q8NCR3 313 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 DMRTA2Q96SC8 542 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 ZNF251Q9BRH9 671 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 SEMA4CQ9C0C4 833 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 CRTAC1Q9NQ79 661 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 TLR8Q9NR97 1041 aaKnown RBP12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 ZNF275Q9NSD4 429 aaPredicted RBP12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 TMEM30AQ9NV96 361 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 FAM120CQ9NX05 1096 aaKnown RBP12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 MBD2Q9UBB5 411 aa12.64□□□□□ -0.39
SPTSSB-201ENST00000359175 NUP214P35658 2090 aaPredicted RBP12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 POM121CA8CG34 1229 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 IRAK2O43187 625 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 PDYNP01213 254 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 ACPPP15309 386 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 RBMS1P29558 406 aaKnown RBP12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 TTPAP49638 278 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 RGNQ15493 299 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 WDR53Q7Z5U6 358 aaPredicted RBP12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 SULF1Q8IWU6 871 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 PDZD9Q8IXQ8 264 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 ZNF687Q8N1G0 1237 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 ARIH2OSQ8N7S6 290 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 OR1M1Q8NGA1 313 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 ELMOD3Q96FG2 381 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 ARL5BQ96KC2 179 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 SHISA3A0PJX4 238 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 SLC28A2O43868 658 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 SDC3O75056 442 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 ARIH2O95376 493 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 CPSF4O95639 269 aaKnown RBP12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 OPN1SWP03999 348 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 ALDOBP05062 364 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 PPIBP23284 216 aaKnown RBP12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 GIFP27352 417 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 FEN1P39748 380 aaKnown RBP12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 GDF5P43026 501 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 PITPNBP48739 271 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 WDR5P61964 334 aaKnown RBP12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 SPOUT1Q5T280 376 aaKnown RBP12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 LYPD4Q6UWN0 246 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 BTN2A1Q7KYR7 527 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 CMIPQ8IY22 773 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 DBF4BQ8NFT6 615 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 BEST4Q8NFU0 473 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 WDR20Q8TBZ3 569 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 SFT2D1Q8WV19 159 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 HMCESQ96FZ2 354 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 CMTM7Q96FZ5 175 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 MRPL48Q96GC5 212 aaKnown RBP12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 COPS8Q99627 209 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 TREX2Q9BQ50 279 aaPredicted RBP12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 CACNG6Q9BXT2 260 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 TMPRSS13Q9BYE2 586 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 OSGEPL1Q9H4B0 414 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 PRDM9Q9NQV7 894 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 ZSCAN32Q9NX65 697 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 MARK1Q9P0L2 795 aa12.63□□□□□ -0.39
SPTSSB-201ENST00000359175 PIM2Q9P1W9 311 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms