RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 DPH1Q9BZG8 443 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PLEK2Q9NYT0 353 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ANKMY1Q9P2S6 941 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 IGHV3-15A0A0B4J1V0 119 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 A0A1W2PPW3 197 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SIGLEC6O43699 453 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 CBX7O95931 251 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 GRPP07492 148 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SGSHP51688 502 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 TPTEP56180 551 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.01□□□□□ -1.293e-6■■■□□ 15.4
VPS13A-202ENST00000357409 RAB12Q6IQ22 244 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PLBD1Q6P4A8 553 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 OR52R1Q8NGF1 315 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 OR52N2Q8NGI0 321 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 HUS1BQ8NHY5 278 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 MUC13Q9H3R2 512 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ACKR4Q9NPB9 350 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 CD93Q9NPY3 652 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 DNMT3BQ9UBC3 853 aaKnown RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PRSS21Q9Y6M0 314 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF840PA6NDX5 716 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 TVP23AA6NH52 213 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PDSS1Q5T2R2 415 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 OLFML1Q6UWY5 402 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 TMPRSS12Q86WS5 348 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 HOMEZQ8IX15 550 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SLC6A18Q96N87 628 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 EIF5A2Q9GZV4 153 aaKnown RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 CXorf21Q9HAI6 301 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 HIF1ANQ9NWT6 349 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 CALML5Q9NZT1 146 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ILVBLA1L0T0 632 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SOX15O60248 233 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SLC16A8O95907 504 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 APOC1P02654 83 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PFKLP17858 780 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 HNRNPA2B1P22626 353 aaKnown RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PPIBP23284 216 aaKnown RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SDC2P34741 201 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 DUSP3P51452 185 aaPredicted RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF84P51523 738 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 DUOXA1Q1HG43 343 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 MANEAQ5SRI9 462 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 LIPKQ5VXJ0 399 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 XKR5Q6UX68 686 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 FBXW12Q6X9E4 464 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF836Q6ZNA1 936 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PLEKHG7Q6ZR37 379 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 HS3ST5Q8IZT8 346 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 GLYATL2Q8WU03 294 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 DCAKDQ8WVC6 231 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 AP3S1Q92572 193 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 TFB2MQ9H5Q4 396 aaKnown RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 A0A1W2PRD5 423 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 A0A1W2PRF3 423 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 A0A1W2PRM7 423 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 MANBAO00462 879 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SLC6A4P31645 630 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 EMP3P54852 163 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 OR4D1Q15615 310 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PTRH1Q86Y79 214 aaKnown RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 AADATQ8N5Z0 425 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 OR52E1Q8NGJ3 308 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 OR52P1PQ8NH57 321 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 DUSP19Q8WTR2 217 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ULBP3Q9BZM4 244 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SMPD3Q9NY59 655 aaPredicted RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 CHD1O14646 1710 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 C17orf105B2RV13 164 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 H3BSA7 217 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SGCEO43556 437 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 RAB4BP61018 213 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 DPYSL2Q16555 572 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 NKPD1Q17RQ9 610 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ALG10BQ5I7T1 473 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 C22orf42Q6IC83 251 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 C3P1Q6ZMU1 363 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PGAM4Q8N0Y7 254 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ERVK13-1Q9NX77 482 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 RAB21Q9UL25 225 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 CCL26Q9Y258 94 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ADGRB3O60242 1522 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 CAMTA1Q9Y6Y1 1673 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PPP6CO00743 305 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 COQ9O75208 318 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SNRPD2P62316 118 aaKnown RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 C6orf183Q5T699 404 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 TMEM110Q86TL2 294 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SHKBP1Q8TBC3 707 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 LRRC15Q8TF66 581 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 MNTQ99583 582 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 CDCP1Q9H5V8 836 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 LRRC10BA6NIK2 292 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 H0Y8G0 127 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 H0Y8X5 98 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ARPC2O15144 300 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 GJA4P35212 333 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 TP53I3Q53FA7 332 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms