RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 AGAP5A6NIR3 686 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 NARSO43776 548 aaKnown RBP23.58■■□□□ 1.37
HDGF-201ENST00000357325 CNOT3O75175 753 aaKnown RBP23.58■■□□□ 1.37
HDGF-201ENST00000357325 ADAP00813 363 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 TNNI3P19429 210 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 SOX3P41225 446 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 PSRC1Q6PGN9 363 aaPredicted RBP23.58■■□□□ 1.37
HDGF-201ENST00000357325 SLC35G5Q96KT7 338 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 FUZQ9BT04 418 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 SLC6A20Q9NP91 592 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 ATG4BQ9Y4P1 393 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 HAT1O14929 419 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 ZSCAN9O15535 394 aaPredicted RBP23.58■■□□□ 1.37
HDGF-201ENST00000357325 KIAA0513O60268 411 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 NR2F1P10589 423 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 RUNX3Q13761 415 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 LYSMD2Q8IV50 215 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 C16orf58Q96GQ5 468 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 SPHK1Q9NYA1 384 aa23.58■■□□□ 1.37
HDGF-201ENST00000357325 SCHIP1Q9P0W5 487 aaPredicted RBP23.58■■□□□ 1.37
HDGF-201ENST00000357325 GPX5O75715 221 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 CHRM4P08173 479 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 TPRG1LQ5T0D9 272 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 C18orf63Q68DL7 685 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 PODNL1Q6PEZ8 512 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 CCDC116Q8IYX3 515 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 TCEANCQ8N8B7 351 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 HERVK_113Q902F9 699 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 DHRS1Q96LJ7 313 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 SLC35C2Q9NQQ7 365 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 CHCHD3Q9NX63 227 aaKnown RBP23.57■■□□□ 1.36
HDGF-201ENST00000357325 GPC6Q9Y625 555 aaPredicted RBP23.57■■□□□ 1.36
HDGF-201ENST00000357325 A0A1W2PR48 441 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 EFCAB10A6NFE3 127 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 WWP2O00308 870 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 XKP51811 444 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 SEC13P55735 322 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 CBX3Q13185 183 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 ILKQ13418 452 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 GPM6BQ13491 265 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 LASP1Q14847 261 aaKnown RBP23.57■■□□□ 1.36
HDGF-201ENST00000357325 FBXO43Q4G163 708 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 STEAP3Q658P3 488 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 TBC1D19Q8N5T2 526 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 OR6T1Q8NGN1 323 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 QRFPRQ96P65 431 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 OPALINQ96PE5 141 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 PCBD2Q9H0N5 130 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 POLR2J3Q9H1A7 115 aaKnown RBP23.57■■□□□ 1.36
HDGF-201ENST00000357325 INIPQ9NRY2 104 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 MAN2C1Q9NTJ4 1040 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 PRKAG2Q9UGJ0 569 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 FBXW2Q9UKT8 454 aa23.57■■□□□ 1.36
HDGF-201ENST00000357325 ERI3O43414 337 aaKnown RBP23.56■■□□□ 1.36
HDGF-201ENST00000357325 MAT2AP31153 395 aaKnown RBP23.56■■□□□ 1.36
HDGF-201ENST00000357325 TRIM23P36406 574 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 SLAMF1Q13291 335 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 ZNF367Q7RTV3 350 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 OR52E1Q8NGJ3 308 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 SUN3Q8TAQ9 357 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 HTRA1Q92743 480 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 ARMC5Q96C12 935 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 CNRIP1Q96F85 164 aaPredicted RBP23.56■■□□□ 1.36
HDGF-201ENST00000357325 CRELD1Q96HD1 420 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 NXF2Q9GZY0 626 aaKnown RBP23.56■■□□□ 1.36
HDGF-201ENST00000357325 ACSS1Q9NUB1 689 aaPredicted RBP23.56■■□□□ 1.36
HDGF-201ENST00000357325 SH3D21A4FU49 640 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 MAN2B1O00754 1011 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 UPK1BO75841 260 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 PEBP1P30086 187 aaKnown RBP23.56■■□□□ 1.36
HDGF-201ENST00000357325 HSD17B2P37059 387 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 RAB28P51157 221 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 SLX4IPQ5VYV7 408 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 KIAA1211LQ6NV74 962 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 PARP16Q8N5Y8 322 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 ZG16BQ96DA0 208 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 TRMT61AQ96FX7 289 aaKnown RBP23.56■■□□□ 1.36
HDGF-201ENST00000357325 ZNF607Q96SK3 696 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 TRMT61BQ9BVS5 477 aaKnown RBP23.56■■□□□ 1.36
HDGF-201ENST00000357325 NT5DC2Q9H857 520 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 P2RX2Q9UBL9 471 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 ACAD8Q9UKU7 415 aa23.56■■□□□ 1.36
HDGF-201ENST00000357325 FRS3O43559 492 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 CEACAM5P06731 702 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 UGT2B15P54855 530 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 RAB8AP61006 207 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 CARTPTQ16568 116 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 ZER1Q7Z7L7 766 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 FCRL4Q96PJ5 515 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 KCNS3Q9BQ31 491 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 KXD1Q9BQD3 176 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 HHATLQ9HCP6 504 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 TVP23BQ9NYZ1 205 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 CNOT2Q9NZN8 540 aaKnown RBP23.55■■□□□ 1.36
HDGF-201ENST00000357325 SCN3AQ9NY46 2000 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 FAAHO00519 579 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 PRKYO43930 277 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 CLEC3AO75596 197 aa23.55■■□□□ 1.36
HDGF-201ENST00000357325 HMGN2P05204 90 aaKnown RBP23.55■■□□□ 1.36
HDGF-201ENST00000357325 MMP11P24347 488 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms