RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PTGR1Q14914 329 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TUBA1AQ71U36 451 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 LRCH3Q96II8 777 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PIP5K1AQ99755 562 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SLC6A7Q99884 636 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 DUSP23Q9BVJ7 150 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CCDC106Q9BWC9 280 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 FGFBP2Q9BYJ0 223 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 C2orf92A0A1B0GVN3 265 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PRAMEF2O60811 474 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 NPPAP01160 153 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 THEGLP0DJG4 465 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CD40LGP29965 261 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 FXYD6P3P58550 94 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 DEFA5Q01523 94 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 KCNC4Q03721 635 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 NSDHLQ15738 373 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 DEFB134Q4QY38 66 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SLC18B1Q6NT16 456 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TIFABQ6ZNK6 161 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TXNDC5Q8NBS9 432 aaKnown RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CASTOR1Q8WTX7 329 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ATOH1Q92858 354 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TMBIM1Q969X1 311 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CREB3L1Q96BA8 519 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 RHBDF1Q96CC6 855 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SGTBQ96EQ0 304 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 XPNPEP1Q9NQW7 623 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SACM1LQ9NTJ5 587 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 UBE2J1Q9Y385 318 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PRSS51A0A1B0GVH4 220 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 GLOD5A6NK44 160 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TLX2O43763 284 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ALDOBP05062 364 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TFAP2AP05549 437 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 DRD2P14416 443 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 RAB31Q13636 194 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CST6Q15828 149 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SH3PXD2AQ5TCZ1 1133 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 MTFR2Q6P444 385 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 WDSUB1Q8N9V3 476 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 OR8K3Q8NH51 312 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 OR52B2Q96RD2 323 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SRPK3Q9UPE1 567 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 COL14A1Q05707 1796 aaKnown RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 FZD9O00144 591 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 HEXAP06865 529 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 HOXD8P13378 290 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 NPR2P20594 1047 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF81P51508 661 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 CSNK2A1P68400 391 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 HHEXQ03014 270 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 OGFOD2Q6N063 350 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 FBXO46Q6PJ61 603 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PIM3Q86V86 326 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 OR5P2Q8WZ92 322 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 C1orf74Q96LT6 269 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 AKTIPQ9H8T0 292 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 ZBTB26Q9HCK0 441 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 TAS2R10Q9NYW0 307 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 LTBP3Q9NS15 1303 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 FAM155AB1AL88 458 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 LSM1O15116 133 aaKnown RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 RP2O75695 350 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 UNGP13051 313 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 GATMP50440 423 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 AKR1C2P52895 323 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SNU13P55769 128 aaKnown RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 GALNT2Q10471 571 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 LMAN2Q12907 356 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 APOFQ13790 326 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 SUSD1Q6UWL2 747 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 HS3ST5Q8IZT8 346 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PYURFQ96I23 114 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 DMRTB1Q96MA1 342 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PELI2Q9HAT8 420 aa5.3□□□□□ -1.56
PTPRD-202ENST00000356435 PAK1IP1Q9NWT1 392 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-202ENST00000356435 LCHNA4D1U4 455 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 H3BSH0 61 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 SNNO75324 88 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 F2P00734 622 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ADORA3P0DMS8 318 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 CDK2P24941 298 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 FADDQ13158 208 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 FAM205BPQ63HN1 556 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 SLC2A7Q6PXP3 512 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 NPLOC4Q8TAT6 608 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 CHPT1Q8WUD6 406 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 GLYATL1Q969I3 302 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TAMM41Q96BW9 452 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ACTR3BQ9P1U1 418 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 PLSCR5A0PG75 271 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 MRPL3P09001 348 aaKnown RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ADRB3P13945 408 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 CSF2RAP15509 400 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ADH7P40394 386 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 MEF2AQ02078 507 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 EMX2Q04743 252 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 HSD17B12Q53GQ0 312 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 C1QTNF12Q5T7M4 302 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms