RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 HEPACAM2A8MVW5 462 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 FFAR1O14842 300 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 DUSP11O75319 330 aaKnown RBP12.92□□□□□ -0.34
TRIM4-203ENST00000355947 C8orf89P0DMQ9 161 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 RHCEP18577 417 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 ETV6P41212 452 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 XCR1P46094 333 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 RAE1P78406 368 aaKnown RBP12.92□□□□□ -0.34
TRIM4-203ENST00000355947 LMAN2Q12907 356 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 OR4K5Q8NGD3 323 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 AP3S1Q92572 193 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 C12orf66Q96MD2 445 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 SPNS1Q9H2V7 528 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 ENAMQ9NRM1 1142 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 NPAP1Q9NZP6 1156 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 H2AFY2Q9P0M6 372 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-203ENST00000355947 PLEKHB1Q9UF11 243 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-203ENST00000355947 CPSF4LA6NMK7 179 aaKnown RBP12.92□□□□□ -0.34
TRIM4-203ENST00000355947 TMEM229AB2RXF0 380 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 H3BSH0 61 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 MPZL2O60487 215 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 TP53P04637 393 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-203ENST00000355947 CD3GP09693 182 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 MSL3P1P0C860 447 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 HOXB6P17509 224 aaKnown RBP12.92□□□□□ -0.34
TRIM4-203ENST00000355947 PTSQ03393 145 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 SUZ12Q15022 739 aaKnown RBP12.92□□□□□ -0.34
TRIM4-203ENST00000355947 REEP3Q6NUK4 255 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 ARL9Q6T311 187 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 DEFB128Q7Z7B8 93 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 OXR1Q8N573 874 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 L3MBTL4Q8NA19 623 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 OR4M1Q8NGD0 313 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 OR8J1Q8NGP2 316 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 AKAP1Q92667 903 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRIM4-203ENST00000355947 RNF170Q96K19 258 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 SPATA9Q9BWV2 254 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 CXorf36Q9H7Y0 433 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 ASIC5Q9NY37 505 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 FTSJ1Q9UET6 329 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 ING4Q9UNL4 249 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 ITM2BQ9Y287 266 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 PTPRDP23468 1912 aa12.92□□□□□ -0.34
TRIM4-203ENST00000355947 PRKRAO75569 313 aaKnown RBP12.91□□□□□ -0.34
TRIM4-203ENST00000355947 RAB36O95755 333 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 SEMG1P04279 462 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 MRPL3P09001 348 aaKnown RBP12.91□□□□□ -0.34
TRIM4-203ENST00000355947 HNMTP50135 292 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 TBPL1P62380 186 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 ASAH1Q13510 395 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 GPR162Q16538 588 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 LDLRAD1Q5T700 205 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 HIST2H2AA3Q6FI13 130 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 TPRG1Q6ZUI0 275 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 C2orf69Q8N8R5 385 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 OR2AP1Q8NGE2 309 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 OR51G2Q8NGK0 314 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 OR4C15Q8NGM1 316 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 SLC38A5Q8WUX1 472 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 ZFPM2Q8WW38 1151 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 RAD9AQ99638 391 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 TRMT61BQ9BVS5 477 aaKnown RBP12.91□□□□□ -0.34
TRIM4-203ENST00000355947 GON7Q9BXV9 100 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 CLEC4MQ9H2X3 399 aaPredicted RBP12.91□□□□□ -0.34
TRIM4-203ENST00000355947 SUV39H2Q9H5I1 410 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 RDH14Q9HBH5 336 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 BTNL2Q9UIR0 455 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 HCN2Q9UL51 889 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 CSNK1G3Q9Y6M4 447 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 C1orf226A1L170 272 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 ZC3H12DA2A288 527 aaKnown RBP12.91□□□□□ -0.34
TRIM4-203ENST00000355947 SERPINI2O75830 405 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 OR7A10O76100 309 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 VNN2O95498 520 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 RPS5P46782 204 aaKnown RBP12.91□□□□□ -0.34
TRIM4-203ENST00000355947 ZNF157P51786 506 aaPredicted RBP12.91□□□□□ -0.34
TRIM4-203ENST00000355947 PODNL1Q6PEZ8 512 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 SYT9Q86SS6 491 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 ASCC3Q8N3C0 2202 aaKnown RBP12.91□□□□□ -0.34
TRIM4-203ENST00000355947 GDPD1Q8N9F7 314 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.91□□□□□ -0.349e-7■■■■■ 35.1
TRIM4-203ENST00000355947 TEX47Q8TBZ9 253 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 C16orf78Q8WTQ4 265 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 CYB5D2Q8WUJ1 264 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 WDR90Q96KV7 1748 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 ENOPH1Q9UHY7 261 aa12.91□□□□□ -0.34
TRIM4-203ENST00000355947 MN1Q10571 1320 aaPredicted RBP12.91□□□□□ -0.34
TRIM4-203ENST00000355947 PRMT3O60678 531 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 RRAS2P62070 204 aaPredicted RBP12.9□□□□□ -0.34
TRIM4-203ENST00000355947 SNRPD1P62314 119 aaKnown RBP12.9□□□□□ -0.34
TRIM4-203ENST00000355947 SLC3A1Q07837 685 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 TOR1AIP1Q5JTV8 583 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 ESPNLQ6ZVH7 1005 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 SLC6A18Q96N87 628 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 F2RL3Q96RI0 385 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 RBFOX1Q9NWB1 397 aaKnown RBP12.9□□□□□ -0.34
TRIM4-203ENST00000355947 CNOT2Q9NZN8 540 aaKnown RBP12.9□□□□□ -0.34
TRIM4-203ENST00000355947 C5orf42Q9H799 3197 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 FEZF1A0PJY2 475 aa12.9□□□□□ -0.34
TRIM4-203ENST00000355947 SH3D21A4FU49 640 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms