RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 KCNAB2Q13303 367 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 ZC3H12BQ5HYM0 836 aaKnown RBP24.17■■□□□ 1.46
CLK2-201ENST00000355560 OGFOD3Q6PK18 319 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 APLFQ8IW19 511 aaPredicted RBP24.17■■□□□ 1.46
CLK2-201ENST00000355560 SHISA5Q8N114 240 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 ZNF300Q96RE9 604 aaPredicted RBP24.17■■□□□ 1.46
CLK2-201ENST00000355560 ZNF347Q96SE7 839 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 EPYCQ99645 322 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 THEGQ9P2T0 379 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 ZNF451Q9Y4E5 1061 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 ADAMDEC1O15204 470 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 NR2F1P10589 423 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 ITGA2P17301 1181 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 PPP2R1BP30154 601 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 MAGEA8P43361 318 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 YAP1P46937 504 aaKnown RBP24.16■■□□□ 1.46
CLK2-201ENST00000355560 RAD23AP54725 363 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 APOFQ13790 326 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 RFX4Q33E94 735 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 TTC23Q5W5X9 447 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 CYP4Z1Q86W10 505 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 MCATQ8IVS2 390 aaKnown RBP24.16■■□□□ 1.46
CLK2-201ENST00000355560 ZNF555Q8NEP9 628 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 NUP43Q8NFH3 380 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 IER2Q9BTL4 223 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 CLK4Q9HAZ1 481 aaKnown RBP24.16■■□□□ 1.46
CLK2-201ENST00000355560 EQTNQ9NQ60 294 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 PRDM9Q9NQV7 894 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 PCDHGB3Q9Y5G1 929 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 KIF1CO43896 1103 aaKnown RBP24.16■■□□□ 1.46
CLK2-201ENST00000355560 MFN2O95140 757 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 SHC2P98077 582 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 C16orf58Q96GQ5 468 aa24.16■■□□□ 1.46
CLK2-201ENST00000355560 A0A1B0GVT2 93 aa24.15■■□□□ 1.46
CLK2-201ENST00000355560 DAPP51397 102 aa24.15■■□□□ 1.46
CLK2-201ENST00000355560 GALNT5Q7Z7M9 940 aa24.15■■□□□ 1.46
CLK2-201ENST00000355560 METTL25Q8N6Q8 603 aa24.15■■□□□ 1.46
CLK2-201ENST00000355560 TSPAN14Q8NG11 270 aa24.15■■□□□ 1.46
CLK2-201ENST00000355560 MIPOL1Q8TD10 442 aa24.15■■□□□ 1.46
CLK2-201ENST00000355560 ZNF607Q96SK3 696 aa24.15■■□□□ 1.46
CLK2-201ENST00000355560 KIF17Q9P2E2 1029 aa24.15■■□□□ 1.46
CLK2-201ENST00000355560 LYVE1Q9Y5Y7 322 aa24.15■■□□□ 1.46
CLK2-201ENST00000355560 SGK494L7N484 410 aa24.14■■□□□ 1.46
CLK2-201ENST00000355560 MITFO75030 526 aaPredicted RBP24.14■■□□□ 1.46
CLK2-201ENST00000355560 CD247P20963 164 aa24.14■■□□□ 1.46
CLK2-201ENST00000355560 GFERP55789 205 aa24.14■■□□□ 1.46
CLK2-201ENST00000355560 KDM4DQ6B0I6 523 aa24.14■■□□□ 1.46
CLK2-201ENST00000355560 TCTN2Q96GX1 697 aa24.14■■□□□ 1.46
CLK2-201ENST00000355560 COL21A1Q96P44 957 aa24.14■■□□□ 1.46
CLK2-201ENST00000355560 TGM7Q96PF1 710 aa24.14■■□□□ 1.46
CLK2-201ENST00000355560 DDX18Q9NVP1 670 aaKnown RBP24.14■■□□□ 1.46
CLK2-201ENST00000355560 RHPN2P1A8MT19 583 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 RECKO95980 971 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 CRISP3P54108 245 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 SPIBQ01892 262 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 ID2Q02363 134 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 PRPF38BQ5VTL8 546 aaKnown RBP24.14■■□□□ 1.45
CLK2-201ENST00000355560 FOXB2Q5VYV0 432 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 USP53Q70EK8 1073 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 CA13Q8N1Q1 262 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 DNAJC22Q8N4W6 341 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 OR7G2Q8NG99 324 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 ANKHQ9HCJ1 492 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 EXD2Q9NVH0 621 aa24.14■■□□□ 1.45
CLK2-201ENST00000355560 J3KTA2 159 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 CYR61O00622 381 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 LDB3O75112 727 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 IFNW1P05000 195 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 TFAP2AP05549 437 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 FESP07332 822 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 CPMP14384 443 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 IL1RL1Q01638 556 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 FUT5Q11128 374 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 FAM111BQ6SJ93 734 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 ARHGEF39Q8N4T4 335 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 ATG16L2Q8NAA4 619 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 TMEM52Q8NDY8 209 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 GPR32P1Q8NGA4 272 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 SEC14L3Q9UDX4 400 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 CLCA2Q9UQC9 943 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 TNFRSF11BO00300 401 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 RDH16O75452 317 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 DNAJB5O75953 348 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 PDGFBP01127 241 aaPredicted RBP24.13■■□□□ 1.45
CLK2-201ENST00000355560 ALDH4A1P30038 563 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 XCR1P46094 333 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 KCNC4Q03721 635 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 PUM1Q14671 1186 aaKnown RBP eCLIP24.13■■□□□ 1.455e-7■■□□□ 13.4
CLK2-201ENST00000355560 KCTD21Q4G0X4 260 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 LIN52Q52LA3 116 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 OLIG3Q7RTU3 272 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 C8orf59Q8N0T1 100 aaPredicted RBP24.13■■□□□ 1.45
CLK2-201ENST00000355560 LGI4Q8N135 537 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 OR9A4Q8NGU2 314 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 APOBEC4Q8WW27 367 aaKnown RBP24.13■■□□□ 1.45
CLK2-201ENST00000355560 PROX1Q92786 737 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 OR7D2Q96RA2 312 aa24.13■■□□□ 1.45
CLK2-201ENST00000355560 RSPO3Q9BXY4 272 aaPredicted RBP24.13■■□□□ 1.45
CLK2-201ENST00000355560 NINQ8N4C6 2090 aa24.12■■□□□ 1.45
CLK2-201ENST00000355560 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms