RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 DHX9Q08211 1270 aaKnown RBP10.34□□□□□ -0.75
RTN3-204ENST00000354497 RPS6KA1Q15418 735 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 XKR6Q5GH73 641 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 RTL4Q6ZR62 310 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 KIF18BQ86Y91 864 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 ERI1Q8IV48 349 aaKnown RBP10.34□□□□□ -0.75
RTN3-204ENST00000354497 ULK2Q8IYT8 1036 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 SPARTQ8N0X7 666 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 RIBC1Q8N443 379 aaPredicted RBP10.34□□□□□ -0.75
RTN3-204ENST00000354497 LIX1Q8N485 282 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 AFAP1L2Q8N4X5 818 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 FITM2Q8N6M3 262 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 GOLM1Q8NBJ4 401 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 NAXEQ8NCW5 288 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 TNIP2Q8NFZ5 429 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 SLC35B2Q8TB61 432 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 ASB11Q8WXH4 323 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 BDH2Q9BUT1 245 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 PCBD2Q9H0N5 130 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 TREX1Q9NSU2 369 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 SACM1LQ9NTJ5 587 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 FOXD3Q9UJU5 478 aaPredicted RBP10.34□□□□□ -0.75
RTN3-204ENST00000354497 STK38LQ9Y2H1 464 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 JMJD1CQ15652 2540 aa10.34□□□□□ -0.75
RTN3-204ENST00000354497 IGKV3D-11A0A0A0MRZ8 115 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 IQANK1A0A1B0GTG1 560 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 TCRBV7S2A1N4TA0A589 114 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 TRIM64A6NGJ6 449 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 TRIM64BA6NI03 449 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 EEF1E1-BLOC1S5C9J1V9 151 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 GOLGA8MH3BSY2 632 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 ZNF701M0R085 212 aaPredicted RBP10.33□□□□□ -0.76
RTN3-204ENST00000354497 EEF1E1O43324 174 aaKnown RBP10.33□□□□□ -0.76
RTN3-204ENST00000354497 SUSD5O60279 629 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 ESRRBO95718 433 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 KRT6AP02538 564 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 KRT6BP04259 564 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 ETS1P14921 441 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 KRT6CP48668 564 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 CLCN7P51798 805 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 AGFG1P52594 562 aaKnown RBP10.33□□□□□ -0.76
RTN3-204ENST00000354497 ATP6V0D1P61421 351 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 CBLBQ13191 982 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 NAE1Q13564 534 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 BMPR2Q13873 1038 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 SPA17Q15506 151 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 MBOAT1Q6ZNC8 495 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 PIWIL4Q7Z3Z4 852 aaKnown RBP10.33□□□□□ -0.76
RTN3-204ENST00000354497 FBXW8Q8N3Y1 598 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 TBC1D19Q8N5T2 526 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 UHMK1Q8TAS1 419 aaKnown RBP10.33□□□□□ -0.76
RTN3-204ENST00000354497 CDKL2Q92772 493 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 RASL10BQ96S79 203 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 ROPN1BQ9BZX4 212 aaPredicted RBP10.33□□□□□ -0.76
RTN3-204ENST00000354497 ROPN1Q9HAT0 212 aaPredicted RBP10.33□□□□□ -0.76
RTN3-204ENST00000354497 TRPS1Q9UHF7 1281 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 NOX1Q9Y5S8 564 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 HEATR5BQ9P2D3 2071 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 FUOMA2VDF0 154 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 BOLA2-SMG1P6H3BVE0 249 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 HCN1O60741 890 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 MGAT1P26572 445 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 CCR8P51685 355 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 PWP1Q13610 501 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 RASA2Q15283 850 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 PHKG1Q16816 387 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 CCNJQ5T5M9 372 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 METTL21CQ5VZV1 264 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 AGTRAPQ6RW13 159 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 SEM1Q6ZVN7 128 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 CXorf67Q86X51 503 aaPredicted RBP10.33□□□□□ -0.76
RTN3-204ENST00000354497 CPNE9Q8IYJ1 553 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 CA13Q8N1Q1 262 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 CCDC89Q8N998 374 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 SUN5Q8TC36 379 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 UTP15Q8TED0 518 aaKnown RBP10.33□□□□□ -0.76
RTN3-204ENST00000354497 MFSD3Q96ES6 412 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 SCYL1Q96KG9 808 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 BTBD9Q96Q07 612 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 NEURL2Q9BR09 285 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 NDEL1Q9GZM8 345 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 SLC6A15Q9H2J7 730 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 EPB41L4BQ9H329 900 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 SEMA4BQ9NPR2 832 aaPredicted RBP10.33□□□□□ -0.76
RTN3-204ENST00000354497 SYBUQ9NX95 663 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 BFARQ9NZS9 450 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 MYOTQ9UBF9 498 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 IFT52Q9Y366 437 aa10.33□□□□□ -0.76
RTN3-204ENST00000354497 C15orf38-AP3S2A0A0A6YYH1 394 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 MYOCOSA0A1B0GUC4 107 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 KDM4EB2RXH2 506 aaPredicted RBP10.32□□□□□ -0.76
RTN3-204ENST00000354497 GFYI3L273 518 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 IL2RAP01589 272 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 HRGP04196 525 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 IFNA16P05015 189 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 CCL3P10147 92 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 ENO3P13929 434 aaPredicted RBP10.32□□□□□ -0.76
RTN3-204ENST00000354497 ARNTP27540 789 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 PIGAP37287 484 aa10.32□□□□□ -0.76
RTN3-204ENST00000354497 ASPHQ12797 758 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms