RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CREB3L4Q8TEY5 395 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 ZNF764Q96H86 408 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-202ENST00000352393 ZNF514Q96K75 400 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-202ENST00000352393 ACAT2Q9BWD1 397 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 ABCB9Q9NP78 766 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 PLEKHB1Q9UF11 243 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-202ENST00000352393 MEIOCA2RUB1 952 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 TLX2O43763 284 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-202ENST00000352393 SLC28A2O43868 658 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 SH3BP5O60239 455 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 VASPP50552 380 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-202ENST00000352393 BNC1Q01954 994 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 MXD1Q05195 221 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 SCN1BQ07699 218 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 PIN1Q13526 163 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-202ENST00000352393 USP30Q70CQ3 517 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 TBC1D19Q8N5T2 526 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 OR5AR1Q8NGP9 310 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 PELI2Q9HAT8 420 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 LHX9Q9NQ69 397 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 CREBZFQ9NS37 354 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 DDX28Q9NUL7 540 aaKnown RBP23.21■■□□□ 1.31
CPNE1-202ENST00000352393 ASF1AQ9Y294 204 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 NOX1Q9Y5S8 564 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 WNT6Q9Y6F9 365 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 COL4A3Q01955 1670 aa23.21■■□□□ 1.31
CPNE1-202ENST00000352393 HMX3A6NHT5 357 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 MMP11P24347 488 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 DDX6P26196 483 aaKnown RBP eCLIP23.2■■□□□ 1.39e-13■■■■□ 20.8
CPNE1-202ENST00000352393 GPR1P46091 355 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 GAS1P54826 345 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 COX10Q12887 443 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 HNRNPA0Q13151 305 aaKnown RBP23.2■■□□□ 1.3
CPNE1-202ENST00000352393 TAB1Q15750 504 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 SYPL1Q16563 259 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 NDUFA9Q16795 377 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 KIAA1211LQ6NV74 962 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 LILRB4Q8NHJ6 448 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 RAD51AP1Q96B01 352 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 EXOSC8Q96B26 276 aaKnown RBP23.2■■□□□ 1.3
CPNE1-202ENST00000352393 ZNF582Q96NG8 517 aaPredicted RBP23.2■■□□□ 1.3
CPNE1-202ENST00000352393 SLC22A4Q9H015 551 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 MAN2C1Q9NTJ4 1040 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 TBC1D14Q9P2M4 693 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 P2RX2Q9UBL9 471 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 M0R3H8 397 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 SEC14L5O43304 696 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 FGF18O76093 207 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 CLEC2LP0C7M8 214 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 KELP23276 732 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 EFNB1P98172 346 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 C3orf38Q5JPI3 329 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 ATAT1Q5SQI0 421 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 XKRXQ6PP77 449 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 FAM131AQ6UXB0 335 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 ZER1Q7Z7L7 766 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 C11orf96Q7Z7L8 435 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 PDZD3Q86UT5 571 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 C17orf64Q86WR6 236 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 ZBED6CLQ96FA7 236 aaPredicted RBP23.2■■□□□ 1.3
CPNE1-202ENST00000352393 ZSCAN32Q9NX65 697 aa23.2■■□□□ 1.3
CPNE1-202ENST00000352393 HOXC11O43248 304 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-202ENST00000352393 ERGP11308 486 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 WEE1P30291 646 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 EPHA5P54756 1037 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 SLAMF1Q13291 335 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 GINS1Q14691 196 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 C22orf42Q6IC83 251 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 UTS2BQ765I0 119 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 OR4K5Q8NGD3 323 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 LRR1Q96L50 414 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 CUEDC1Q9NWM3 386 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-202ENST00000352393 TAC3Q9UHF0 121 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 GPR34Q9UPC5 381 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 KLHL20Q9Y2M5 609 aa23.19■■□□□ 1.3
CPNE1-202ENST00000352393 A6NL46 340 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 TMPRSS11DO60235 418 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 CSF3P09919 207 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 CCT3P49368 545 aaKnown RBP23.18■■□□□ 1.3
CPNE1-202ENST00000352393 TBRG1Q3YBR2 411 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 DCUN1D3Q8IWE4 304 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 AIF1LQ9BQI0 150 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 MED18Q9BUE0 208 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 TMEM245Q9H330 911 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 WASH6PQ9NQA3 447 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 ACSS1Q9NUB1 689 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-202ENST00000352393 PCYT1BQ9Y5K3 369 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-202ENST00000352393 A8MV72 311 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-202ENST00000352393 STK25O00506 426 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 ADH1AP07327 375 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 OR12D1P0DN82 309 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 GIPRP48546 466 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 CDK5Q00535 292 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 ACSM5Q6NUN0 579 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 GDPD1Q8N9F7 314 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 MORN4Q8NDC4 146 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 SLC35G5Q96KT7 338 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 QRFPRQ96P65 431 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 MMP28Q9H239 520 aa23.18■■□□□ 1.3
CPNE1-202ENST00000352393 OR51I1Q9H343 314 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms