RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 UGT2B17O75795 530 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 SOX14O95416 240 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 SERPIND1P05546 499 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 NR2F1P10589 423 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 DGKEP52429 567 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 RHAGQ02094 409 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 ALDH6A1Q02252 535 aaKnown RBP20.91■□□□□ 0.94
UPF3A-201ENST00000351487 PRKCDQ05655 676 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 HYAL2Q12891 473 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 DUSP6Q16828 381 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 COMTD1Q86VU5 262 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 SFXN5Q8TD22 340 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 XAGE5Q8WWM1 108 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 RNF167Q9H6Y7 350 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 UGT2A1Q9Y4X1 527 aa20.91■□□□□ 0.94
UPF3A-201ENST00000351487 TP53P04637 393 aaPredicted RBP20.9■□□□□ 0.94
UPF3A-201ENST00000351487 NCBP2P52298 156 aaKnown RBP eCLIP20.9■□□□□ 0.944e-7■■■■□ 22.1
UPF3A-201ENST00000351487 ARFIP1P53367 373 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 SLC9A5Q14940 896 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 TSTQ16762 297 aaKnown RBP20.9■□□□□ 0.94
UPF3A-201ENST00000351487 TPRG1LQ5T0D9 272 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 CD300LDQ6UXZ3 194 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 SZRD1Q7Z422 152 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 OR8J1Q8NGP2 316 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 BTBD1Q9H0C5 482 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 RMI1Q9H9A7 625 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 KCNK6Q9Y257 313 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 CHD9Q3L8U1 2897 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 A0A1W2PP55 124 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 ARHGAP33O14559 1287 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 PRICKLE3O43900 615 aaPredicted RBP20.9■□□□□ 0.94
UPF3A-201ENST00000351487 PAK4O96013 591 aaPredicted RBP20.9■□□□□ 0.94
UPF3A-201ENST00000351487 IMPDH2P12268 514 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 FEN1P39748 380 aaKnown RBP20.9■□□□□ 0.94
UPF3A-201ENST00000351487 WASP42768 502 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 ZNF45Q02386 682 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.9■□□□□ 0.94
UPF3A-201ENST00000351487 DNASE1L3Q13609 305 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 ZNF181Q2M3W8 571 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 MRM1Q6IN84 353 aaKnown RBP20.9■□□□□ 0.94
UPF3A-201ENST00000351487 IL17RCQ8NAC3 791 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 MS4A6EQ96DS6 147 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 SARGQ9BW04 601 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 ROGDIQ9GZN7 287 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 KLHL31Q9H511 634 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 SLC6A20Q9NP91 592 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 MRPS30Q9NP92 439 aaKnown RBP20.9■□□□□ 0.94
UPF3A-201ENST00000351487 TRPC4Q9UBN4 977 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 LSM2Q9Y333 95 aaKnown RBP20.9■□□□□ 0.94
UPF3A-201ENST00000351487 DOCK8Q8NF50 2099 aa20.9■□□□□ 0.94
UPF3A-201ENST00000351487 C4orf51C9J302 202 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 H3BN98 237 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 LATO43561 262 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 IGFBP1P08833 259 aaPredicted RBP20.89■□□□□ 0.94
UPF3A-201ENST00000351487 ANXA11P50995 505 aaKnown RBP20.89■□□□□ 0.94
UPF3A-201ENST00000351487 DOC2BQ14184 412 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 SSX1Q16384 188 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 CASP12Q6UXS9 341 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 LYSMD2Q8IV50 215 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 KLHL6Q8WZ60 621 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 SPATA5L1Q9BVQ7 753 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 RACGAP1Q9H0H5 632 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 MKLN1Q9UL63 735 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 CFL2Q9Y281 166 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 SLC17A4Q9Y2C5 497 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 SLC9A8Q9Y2E8 581 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 ASB4Q9Y574 426 aa20.89■□□□□ 0.94
UPF3A-201ENST00000351487 MDC1Q14676 2089 aaKnown RBP20.89■□□□□ 0.93
UPF3A-201ENST00000351487 M0R3H8 397 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 KCNJ13O60928 360 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 ADAM23O75077 832 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 NME6O75414 186 aaPredicted RBP20.89■□□□□ 0.93
UPF3A-201ENST00000351487 CEACAM5P06731 702 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 HIST1H1TP22492 207 aaPredicted RBP20.89■□□□□ 0.93
UPF3A-201ENST00000351487 CSTF2P33240 577 aaKnown RBP eCLIP20.89■□□□□ 0.93
UPF3A-201ENST00000351487 AHRP35869 848 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 ABATP80404 500 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 FUT5Q11128 374 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 TARDBPQ13148 414 aaKnown RBP eCLIP20.89■□□□□ 0.938e-6■□□□□ 10.7
UPF3A-201ENST00000351487 PIN1Q13526 163 aaPredicted RBP20.89■□□□□ 0.93
UPF3A-201ENST00000351487 OCLNQ16625 522 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 NDUFA9Q16795 377 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 INAVAQ3KP66 663 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 RNLSQ5VYX0 342 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 BHLHB9Q6PI77 547 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 SLC22A16Q86VW1 577 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 LINC00471Q8N535 108 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 OR52E1Q8NGJ3 308 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 SLC6A18Q96N87 628 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 OPALINQ96PE5 141 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 BBS4Q96RK4 519 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 C1QTNF2Q9BXJ5 285 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 MVB12BQ9H7P6 319 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 SP140LQ9H930 580 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 PRDM7Q9NQW5 492 aa20.89■□□□□ 0.93
UPF3A-201ENST00000351487 ZSCAN9O15535 394 aaPredicted RBP20.88■□□□□ 0.93
UPF3A-201ENST00000351487 GUCY1B2O75343 617 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 PRKRAO75569 313 aaKnown RBP20.88■□□□□ 0.93
UPF3A-201ENST00000351487 EPPINO95925 133 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 SCG5P05408 212 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms