RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 FAM46DQ8NEK8 389 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF555Q8NEP9 628 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 OR56A1Q8NGH5 318 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 OR10G6Q8NH81 332 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 SPPL2AQ8TCT8 520 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 RAB8BQ92930 207 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ELP4Q96EB1 424 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 GIMAP5Q96F15 307 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 SLC35G5Q96KT7 338 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 DHRS1Q96LJ7 313 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 BBS4Q96RK4 519 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 PIP5K1AQ99755 562 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 GABARAPL3Q9BY60 117 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 OR51I1Q9H343 314 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 SEMA6CQ9H3T2 930 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ZCCHC3Q9NUD5 404 aaKnown RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ACER3Q9NUN7 267 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 GIMAP4Q9NUV9 329 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 DNAAF2Q9NVR5 837 aaKnown RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 HRASLS2Q9NWW9 162 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 MS4A12Q9NXJ0 267 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 PSME2Q9UL46 239 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 RAB23Q9ULC3 237 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 NDRG4Q9ULP0 352 aaKnown RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 DAPP1Q9UN19 280 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ENTPD4Q9Y227 616 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 MRPS2Q9Y399 296 aaKnown RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 PCDHGA8Q9Y5G5 932 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 GPC6Q9Y625 555 aaPredicted RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 SLC22A7Q9Y694 548 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 HSPE1-MOB4S4R3N1 261 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 U3KQV3 271 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 HEATR5BQ9P2D3 2071 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ZFHX2Q9C0A1 2572 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ARRDC5A6NEK1 342 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 C5orf58C9J3I9 102 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 K7ESF4 209 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 TLR4O00206 839 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 TNFRSF11BO00300 401 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 CYR61O00622 381 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ASNA1O43681 348 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 B3GALT2O43825 422 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 GALR3O60755 368 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ERAL1O75616 437 aaKnown RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ATXN8OSP0DMR3 200 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ETS2P15036 469 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ATP6V1B1P15313 513 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 JUNBP17275 347 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 TNFRSF1BP20333 461 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF10P21506 573 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 MATN1P21941 496 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 CPN2P22792 545 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 CRHBPP24387 322 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ELK4P28324 431 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 MPIP34949 423 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 GPC1P35052 558 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 FEN1P39748 380 aaKnown RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 BUD31P41223 144 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 OR1E2P47887 323 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 GABRA4P48169 554 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ANXA11P50995 505 aaKnown RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 MAZP56270 477 aaKnown RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 NXPH1P58417 271 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 GABARAPL2P60520 117 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 PPP1CAP62136 330 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ZP2Q05996 745 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 FUT5Q11128 374 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 TOP3AQ13472 1001 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 TP53BP2Q13625 1128 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 LAPTM4AQ15012 233 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ELOCQ15369 112 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 CTU2Q2VPK5 515 aaKnown RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 DEFB134Q4QY38 66 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 C6orf141Q5SZD1 244 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF770Q6IQ21 691 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF773Q6PK81 442 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 MAMSTRQ6ZN01 415 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ABHD13Q7L211 337 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 GKN2Q86XP6 184 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ARL14Q8N4G2 192 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 DNAJC22Q8N4W6 341 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 CSNK1A1LQ8N752 337 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 SMYD1Q8NB12 490 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 OR4K14Q8NGD5 310 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 OR9A2Q8NGT5 310 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 BBS10Q8TAM1 723 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 GIPC3Q8TF64 312 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 DNASE2BQ8WZ79 361 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF566Q969W8 418 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF285Q96NJ3 590 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 CSF3RQ99062 836 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 TREX2Q9BQ50 279 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 FUZQ9BT04 418 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 NPLQ9BXD5 320 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-203ENST00000350034 CHRNA10Q9GZZ6 450 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 KLHL25Q9H0H3 589 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 RUBCNLQ9H714 662 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 TBC1D17Q9HA65 648 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 FAM60AQ9NP50 221 aa6.51□□□□□ -1.37
TRIM55-203ENST00000350034 ENAMQ9NRM1 1142 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms