RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 RPIAP49247 311 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 RGS4P49798 205 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 ADAM15Q13444 863 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 OCLNQ16625 522 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 TECPR1Q7Z6L1 1165 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 RBFAQ8N0V3 343 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 L3MBTL4Q8NA19 623 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 OR8J1Q8NGP2 316 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 GEMIN6Q8WXD5 167 aaKnown RBP13.52□□□□□ -0.24
RLIM-202ENST00000349225 ZNF582Q96NG8 517 aaPredicted RBP13.52□□□□□ -0.24
RLIM-202ENST00000349225 TMED9Q9BVK6 235 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 BRD7Q9NPI1 651 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 ARL15Q9NXU5 204 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 MBD1Q9UIS9 605 aaPredicted RBP13.52□□□□□ -0.24
RLIM-202ENST00000349225 TEX13CA0A0J9YWL9 993 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 TRBC2A0A5B9 178 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 ARRDC5A6NEK1 342 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 ZNF98A6NK75 572 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 POM121CA8CG34 1229 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 EIF4EP06730 217 aaKnown RBP13.52□□□□□ -0.25
RLIM-202ENST00000349225 LPLP06858 475 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 SULT1A3P0DMM9 295 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 SULT1A4P0DMN0 295 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 IDSP22304 550 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 GSTM5P46439 218 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 XKP51811 444 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 YBEYP58557 167 aaPredicted RBP13.52□□□□□ -0.25
RLIM-202ENST00000349225 WDR5P61964 334 aaKnown RBP13.52□□□□□ -0.25
RLIM-202ENST00000349225 ETFDHQ16134 617 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 NTRK2Q16620 822 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 SPIN4Q56A73 249 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 C6orf132Q5T0Z8 1188 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 OVCH2Q7RTZ1 564 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 LSRQ86X29 649 aaPredicted RBP13.52□□□□□ -0.25
RLIM-202ENST00000349225 RBM45Q8IUH3 476 aaKnown RBP13.52□□□□□ -0.25
RLIM-202ENST00000349225 GPR135Q8IZ08 494 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 FAM9CQ8IZT9 166 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 PIAS4Q8N2W9 510 aaPredicted RBP13.52□□□□□ -0.25
RLIM-202ENST00000349225 LINC00469Q8N7U9 141 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 OR4A15Q8NGL6 344 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 OR5AK3PQ8NH89 298 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 ABHD1Q96SE0 405 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 RDH14Q9HBH5 336 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 B4GALT3O60512 393 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 PTP4A3O75365 173 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 B3GAT3O94766 335 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 SNAI1O95863 264 aaPredicted RBP13.52□□□□□ -0.25
RLIM-202ENST00000349225 HPXP02790 462 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 PTBP1P26599 531 aaKnown RBP eCLIP13.52□□□□□ -0.25
RLIM-202ENST00000349225 SLC6A4P31645 630 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 ERVFC1P60507 584 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 ACSM5Q6NUN0 579 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 FAM92BQ6ZTR7 304 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 IL17RCQ8NAC3 791 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 LRR1Q96L50 414 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 UQCC2Q9BRT2 126 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 SPON2Q9BUD6 331 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 ZNF304Q9HCX3 659 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 BTNL2Q9UIR0 455 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 CACNG2Q9Y698 323 aa13.52□□□□□ -0.25
RLIM-202ENST00000349225 ZNF106Q9H2Y7 1883 aaKnown RBP13.52□□□□□ -0.25
RLIM-202ENST00000349225 A8MXK9 166 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 TCRBP04435 133 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 LIMS3P0CW19 117 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 LIMS4P0CW20 117 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 DPEP1P16444 411 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 RHCEP18577 417 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 CCR6P51684 374 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 PCBP3P57721 371 aaKnown RBP13.51□□□□□ -0.25
RLIM-202ENST00000349225 XKR6Q5GH73 641 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 C17orf107Q6ZR85 190 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 USP45Q70EL2 814 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 DGLUCYQ7Z3D6 616 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 WDR89Q96FK6 387 aaPredicted RBP13.51□□□□□ -0.25
RLIM-202ENST00000349225 FUBP3Q96I24 572 aaKnown RBP eCLIP13.51□□□□□ -0.25
RLIM-202ENST00000349225 BEX1Q9HBH7 125 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 HCN3Q9P1Z3 774 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 KIF25Q9UIL4 384 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 CD8B2A6NJW9 211 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 EEF1E1O43324 174 aaKnown RBP13.51□□□□□ -0.25
RLIM-202ENST00000349225 CD8BP10966 210 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 AHCYP23526 432 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 ELAVL4P26378 380 aaKnown RBP13.51□□□□□ -0.25
RLIM-202ENST00000349225 RAB14P61106 215 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 EFNB1P98172 346 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 GSG1Q2KHT4 349 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 PRSS53Q2L4Q9 553 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 SEZ6L2Q6UXD5 910 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 CASP12Q6UXS9 341 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 FTMTQ8N4E7 242 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 TTC9BQ8N6N2 239 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 HJURPQ8NCD3 748 aaPredicted RBP13.51□□□□□ -0.25
RLIM-202ENST00000349225 NEIL3Q8TAT5 605 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 NPAS1Q99742 590 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 TBC1D17Q9HA65 648 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 RAB23Q9ULC3 237 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 SCN8AQ9UQD0 1980 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 USP34Q70CQ2 3546 aa13.51□□□□□ -0.25
RLIM-202ENST00000349225 TRDV1A0A1B0GX56 115 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms