RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 SLC35E2P0CK97 266 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 MATN1P21941 496 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 PSMA4P25789 261 aaKnown RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 PTGER1P34995 402 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 VHLP40337 213 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 MAN2A2P49641 1150 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 PRIM2P49643 509 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 CRYBA2P53672 197 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 PCBP3P57721 371 aaKnown RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 SESN3P58005 492 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 DSTNP60981 165 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 MAT1AQ00266 395 aaKnown RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 CDK6Q00534 326 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 MAP4K2Q12851 820 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 TRA2AQ13595 282 aaKnown RBP eCLIP10.3□□□□□ -0.76
ECM1-201ENST00000346569 ERV3-1Q14264 604 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 SF3A2Q15428 464 aaKnown RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 LTB4RQ15722 352 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 SYT16Q17RD7 645 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 ZNF630Q2M218 657 aaPredicted RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 ZNF628Q5EBL2 1059 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 CRB2Q5IJ48 1285 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 TBCELQ5QJ74 424 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 EXOSC6Q5RKV6 272 aaKnown RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 GCNT6Q5T4J0 391 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 HMBOX1Q6NT76 420 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 ENPP6Q6UWR7 440 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 TMEM107Q6UX40 140 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 CEACAM20Q6UY09 585 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 EIF3MQ7L2H7 374 aaKnown RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 ASCL5Q7RTU5 278 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 ERMP1Q7Z2K6 904 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 GPR135Q8IZ08 494 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 FAM86B1Q8N7N1 296 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 RCBTB1Q8NDN9 531 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 NUP43Q8NFH3 380 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 ADCY4Q8NFM4 1077 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 OR7G2Q8NG99 324 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 OR56A1Q8NGH5 318 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 ZNF675Q8TD23 568 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 KAT2AQ92830 837 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 FAM162AQ96A26 154 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 CTHRC1Q96CG8 243 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 PEX11GQ96HA9 241 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 PYURFQ96I23 114 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 CCDC74BQ96LY2 380 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 GFM1Q96RP9 751 aaKnown RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 EFHD1Q9BUP0 239 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 CHID1Q9BWS9 393 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 UGT2B28Q9BY64 529 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 ZMYND15Q9H091 742 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 C3orf14Q9HBI5 128 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 A4GALTQ9NPC4 353 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 ZCCHC3Q9NUD5 404 aaKnown RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 IRAK4Q9NWZ3 460 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 THUMPD1Q9NXG2 353 aaKnown RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 SIDT1Q9NXL6 827 aaKnown RBP10.3□□□□□ -0.76
ECM1-201ENST00000346569 HCN3Q9P1Z3 774 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 PTGFRNQ9P2B2 879 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 ZNF639Q9UID6 485 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 CDC14AQ9UNH5 594 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 CLCA2Q9UQC9 943 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 LRRC42Q9Y546 428 aa10.3□□□□□ -0.76
ECM1-201ENST00000346569 MYOCOSA0A1B0GUC4 107 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 PEX1O43933 1283 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 PLOD3O60568 738 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 CBFA2T3O75081 653 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 TIPRLO75663 272 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 HMGN2P05204 90 aaKnown RBP10.29□□□□□ -0.76
ECM1-201ENST00000346569 OR12D1P0DN82 309 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 RAP2AP10114 183 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 S1PR1P21453 382 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 ALAS2P22557 587 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 PPP2R1BP30154 601 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 MC3RP41968 323 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 HSD17B7P56937 341 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 BTG2P78543 158 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 TXNL4AP83876 142 aaKnown RBP10.29□□□□□ -0.76
ECM1-201ENST00000346569 ID2Q02363 134 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 BIKQ13323 160 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 TP53BP2Q13625 1128 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 SCARB2Q14108 478 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 ELOAQ14241 798 aaKnown RBP10.29□□□□□ -0.76
ECM1-201ENST00000346569 PRICKLE4Q2TBC4 344 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 SPDYE7PQ495Y7 208 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 TRMT12Q53H54 448 aaKnown RBP10.29□□□□□ -0.76
ECM1-201ENST00000346569 OGFRL1Q5TC84 451 aaPredicted RBP10.29□□□□□ -0.76
ECM1-201ENST00000346569 RHBDD2Q6NTF9 364 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 TNFAIP8L2Q6P589 184 aaPredicted RBP10.29□□□□□ -0.76
ECM1-201ENST00000346569 BHLHB9Q6PI77 547 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 FAM111BQ6SJ93 734 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 ANGPTL8Q6UXH0 198 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 AMIGO2Q86SJ2 522 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 ZC3H7AQ8IWR0 971 aaKnown RBP10.29□□□□□ -0.76
ECM1-201ENST00000346569 SLC30A8Q8IWU4 369 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 OR2L13Q8N349 312 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 METTL25Q8N6Q8 603 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 FBXO30Q8TB52 745 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 SLC38A5Q8WUX1 472 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms