RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 PANX1Q96RD7 426 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 CGREF1Q99674 301 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 TUBB6Q9BUF5 446 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 PITHD1Q9GZP4 211 aaPredicted RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 KAT8Q9H7Z6 458 aaKnown RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 S100A14Q9HCY8 104 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 FLRT3Q9NZU0 649 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 KCNE5Q9UJ90 142 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 SNX13Q9Y5W8 968 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 CLDN24A6NM45 220 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 YKT6O15498 198 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 EFSO43281 561 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 GFRA3O60609 400 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 SRPX2O60687 465 aaPredicted RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 FGF5P12034 268 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ETFAP13804 333 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 PRDX6P30041 224 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 NR0B1P51843 470 aaKnown RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 IL10RAQ13651 578 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 FAM53BQ14153 422 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 TRIP10Q15642 601 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 SFT2D3Q587I9 215 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 MTX3Q5HYI7 312 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ARMC6Q6NXE6 501 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ENPP6Q6UWR7 440 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 SLC44A2Q8IWA5 706 aaPredicted RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 HS3ST5Q8IZT8 346 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 NAT6Q93015 286 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ZNF570Q96NI8 536 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 CENPKQ9BS16 269 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ASPSCR1Q9BZE9 553 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 KLK13Q9UKR3 277 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 MAN2B2Q9Y2E5 1009 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 LOXL2Q9Y4K0 774 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 SNX8Q9Y5X2 465 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 NVLO15381 856 aaKnown RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 CBX7O95931 251 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 PCSK2P16519 638 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 PRPS1L1P21108 318 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 CXCR2P25025 360 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 CCKBRP32239 447 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 GPR143P51810 404 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 TRIM25Q14258 630 aaKnown RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 HERC3Q15034 1050 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 RSPO4Q2I0M5 234 aaPredicted RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 RUNDC3AQ59EK9 446 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ZNF628Q5EBL2 1059 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 RPS26P11Q5JNZ5 115 aaPredicted RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 CAMKVQ8NCB2 501 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ICA1LQ8NDH6 482 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 RAB8BQ92930 207 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 COL26A1Q96A83 441 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 TBC1D20Q96BZ9 403 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 REPS1Q96D71 796 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ANKRD27Q96NW4 1050 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 CPPED1Q9BRF8 314 aaPredicted RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 KCNH6Q9H252 994 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ASCL3Q9NQ33 180 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 PFDN4Q9NQP4 134 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 SLC35C2Q9NQQ7 365 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ADAM10O14672 748 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 KCNK5O95279 499 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 IGKV1D-16P01601 117 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 S100A3P33764 101 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 KIR3DL1P43629 444 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 MAPK10P53779 464 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 AQP4P55087 323 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 ITGA1P56199 1179 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 EEF1A2Q05639 463 aaKnown RBP6.82□□□□□ -1.32
GDNF-202ENST00000344622 ZNF33BQ06732 778 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 Q0VFX4 171 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 NNATQ16517 81 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 SMU1Q2TAY7 513 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 TMEM35AQ53FP2 167 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 AP1ARQ63HQ0 302 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 CPZQ66K79 652 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 LRRC74BQ6ZQY2 392 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 RAB11FIP2Q7L804 512 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 HORMAD2Q8N7B1 307 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 SLC16A11Q8NCK7 471 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 CCDC115Q96NT0 180 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 SERINC2Q96SA4 455 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 CD180Q99467 661 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 KCTD14Q9BQ13 255 aaPredicted RBP6.82□□□□□ -1.32
GDNF-202ENST00000344622 NRSN2Q9GZP1 204 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 MMADHCQ9H3L0 296 aaPredicted RBP6.82□□□□□ -1.32
GDNF-202ENST00000344622 LEF1Q9UJU2 399 aaPredicted RBP6.82□□□□□ -1.32
GDNF-202ENST00000344622 U3KQV3 271 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 ALPK2Q86TB3 2170 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 MEN1O00255 615 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 HMGN4O00479 90 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 RFXANKO14593 260 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 TOX3O15405 576 aaPredicted RBP6.82□□□□□ -1.32
GDNF-202ENST00000344622 FCMRO60667 390 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 HNRNPCL1O60812 293 aaKnown RBP6.82□□□□□ -1.32
GDNF-202ENST00000344622 VPS4BO75351 444 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 CCNDBP1O95273 360 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 MT-CO3P00414 261 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 PRPS2P11908 318 aa6.82□□□□□ -1.32
GDNF-202ENST00000344622 LSM11P83369 360 aaKnown RBP eCLIP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms