RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 DOC2BQ14184 412 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 Q96MT0 163 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 SYNPO2LQ9H987 977 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 EQTNQ9NQ60 294 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 UGT2B17O75795 530 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 DDX5P17844 614 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 CDH3P22223 829 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 CERS1P27544 350 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 PKLRP30613 574 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 NTSP30990 170 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 PBX2P40425 430 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 RGS6P49758 472 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 UGT2B15P54855 530 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 SLC9A5Q14940 896 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 TSTQ16762 297 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 C18orf63Q68DL7 685 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 TMEM107Q6UX40 140 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 DGLUCYQ7Z3D6 616 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 C11orf74Q86VG3 221 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 FAM46DQ8NEK8 389 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 SLC7A13Q8TCU3 470 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 NT5DC2Q9H857 520 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 ACSS1Q9NUB1 689 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 REV1Q9UBZ9 1251 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 ENOPH1Q9UHY7 261 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 WBP11Q9Y2W2 641 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 IFT52Q9Y366 437 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 DENND4AQ7Z401 1863 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 SERPINB7O75635 380 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 ADH1BP00325 375 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 ADAP00813 363 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 CKMT1AP12532 417 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 OSMP13725 252 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 PPP2R1BP30154 601 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 IGFALSP35858 605 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 BUD31P41223 144 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 XKP51811 444 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 ZNF404Q494X3 552 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 TOR1AIP1Q5JTV8 583 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 PARM1Q6UWI2 310 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 NATD1Q8N6N6 113 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 PPP1R14BQ96C90 147 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 PSD2Q9BQI7 771 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 FAIM2Q9BWQ8 316 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 BTBD1Q9H0C5 482 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 POLR2J3Q9H1A7 115 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 SCHIP1Q9P0W5 487 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 BRWD1Q9NSI6 2320 aa14.07□□□□□ -0.16
VIPAS39-202ENST00000343765 A0A1W2PR48 441 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 EFCAB10A6NFE3 127 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 RFXAPO00287 272 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 LRRC32Q14392 662 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 NIPAL1Q6NVV3 410 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 PGBD2Q6P3X8 592 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 FGF14Q92915 247 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 C16orf58Q96GQ5 468 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 FCRL4Q96PJ5 515 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 SNRNP200O75643 2136 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TRBV23OR9-2A0A075B6M9 112 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D3DA0A087WVF3 549 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D3IA0A087WXS9 549 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D3EA0A087X179 549 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D3KA0A087X1G2 549 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 ARRDC5A6NEK1 342 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D3FA6NER0 549 aaPredicted RBP14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D3LB9A6J9 549 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 MAN2B1O00754 1011 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 LINC01565O15544 149 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 CHRM4P08173 479 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D3HP0C7X1 549 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 HIST1H1TP22492 207 aaPredicted RBP14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 PEBP1P30086 187 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 RPS21P63220 83 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 RELAQ04206 551 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 OXA1LQ15070 435 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 GPAT3Q53EU6 434 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D3GQ6DHY5 549 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D3CQ6IPX1 549 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 USP43Q70EL4 1123 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 RD3Q7Z3Z2 195 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TBC1D3Q8IZP1 549 aaPredicted RBP14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 ACOT4Q8N9L9 421 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 OR2L8Q8NGY9 312 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 MS4A6EQ96DS6 147 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 MYADMQ96S97 322 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 PRR14Q9BWN1 585 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 SLC17A9Q9BYT1 436 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 TRPV4Q9HBA0 871 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 ABCB10Q9NRK6 738 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 OBP2AQ9NY56 170 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 ADAM29Q9UKF5 820 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 YBX2Q9Y2T7 364 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 KCNE3Q9Y6H6 103 aa14.06□□□□□ -0.16
VIPAS39-202ENST00000343765 KRBA1A5PL33 1030 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 FAAHO00519 579 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 NARSO43776 548 aaKnown RBP14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 AIFM1O95831 613 aa14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 HMGN2P05204 90 aaKnown RBP14.05□□□□□ -0.16
VIPAS39-202ENST00000343765 RAB15P59190 212 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms