RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PCNX2A6NKB5 2137 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 C1orf226A1L170 272 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 C4orf47A7E2U8 309 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 AGRPO00253 132 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 CYR61O00622 381 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 RFXANKO14593 260 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 HYAL3O43820 417 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 ERN1O75460 977 aaKnown RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 C6orf47O95873 294 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 TCN1P20061 433 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 TRPC1P48995 793 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 ARL4DP49703 201 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 ZNF750Q32MQ0 723 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 GARNL3Q5VVW2 1013 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 SLC48A1Q6P1K1 146 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 ZNF551Q7Z340 670 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 GOT1L1Q8NHS2 421 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 EXOSC8Q96B26 276 aaKnown RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 PLEKHA8Q96JA3 519 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 PHF12Q96QT6 1004 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 PANX1Q96RD7 426 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 DPYSL5Q9BPU6 564 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 NPLQ9BXD5 320 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 LYRM4Q9HD34 91 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 ATAD3AQ9NVI7 634 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 SIDT1Q9NXL6 827 aaKnown RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 FER1L5A0AVI2 2057 aa13.83□□□□□ -0.19
CXCL12-201ENST00000343575 FAM227AF5H4B4 570 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 SERPINB7O75635 380 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 OR2B3O76000 313 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 CPSF4O95639 269 aaKnown RBP13.83□□□□□ -0.2
CXCL12-201ENST00000343575 OCM2P0CE71 109 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 OCMP0CE72 109 aaPredicted RBP13.83□□□□□ -0.2
CXCL12-201ENST00000343575 BCAP31P51572 246 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 MTPNP58546 118 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 TNFRSF17Q02223 184 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 MERTKQ12866 999 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 GAB1Q13480 694 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 TUBA3CQ13748 450 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 GRM7Q14831 915 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 CLPPQ16740 277 aaPredicted RBP13.83□□□□□ -0.2
CXCL12-201ENST00000343575 TMTC4Q5T4D3 741 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 ANXA8L1Q5VT79 327 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 HMBOX1Q6NT76 420 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 DCDC5Q6ZRR9 648 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 GPR155Q7Z3F1 870 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 CLEC4FQ8N1N0 589 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 ZNF786Q8N393 782 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 SUN3Q8TAQ9 357 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 TRUB1Q8WWH5 349 aaKnown RBP13.83□□□□□ -0.2
CXCL12-201ENST00000343575 CNRIP1Q96F85 164 aaPredicted RBP13.83□□□□□ -0.2
CXCL12-201ENST00000343575 ZNF681Q96N22 645 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 ADI1Q9BV57 179 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 FAIM2Q9BWQ8 316 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 RPF2Q9H7B2 306 aaKnown RBP13.83□□□□□ -0.2
CXCL12-201ENST00000343575 LIN28AQ9H9Z2 209 aaKnown RBP13.83□□□□□ -0.2
CXCL12-201ENST00000343575 ANKHQ9HCJ1 492 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 UTS2RQ9UKP6 389 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 USP22Q9UPT9 525 aa13.83□□□□□ -0.2
CXCL12-201ENST00000343575 ZNF749O43361 778 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 LRP3O75074 770 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 GUCY1B2O75343 617 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 NSA2O95478 260 aaKnown RBP13.82□□□□□ -0.2
CXCL12-201ENST00000343575 INHBBP09529 407 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 NR2F6P10588 404 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 ZNF10P21506 573 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-201ENST00000343575 CPN2P22792 545 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 FASP25445 335 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 TMBIM6P55061 237 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 SIM1P81133 766 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-201ENST00000343575 CEBPEQ15744 281 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 SLC36A3Q495N2 470 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 CCDC92Q53HC0 331 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-201ENST00000343575 OR8J3Q8NGG0 315 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 DNAJB8Q8NHS0 232 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 TBC1D15Q8TC07 691 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 CENPNQ96H22 339 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-201ENST00000343575 CPPED1Q9BRF8 314 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-201ENST00000343575 SLC35C2Q9NQQ7 365 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 CUTCQ9NTM9 273 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 GIN1Q9NXP7 522 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 A0A1W2PRB8 838 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 FUOMA2VDF0 154 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 H3BMQ9 156 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 CHST10O43529 356 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 GPIP06744 558 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 HSD17B1P14061 328 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 GZMMP51124 257 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 MAT1AQ00266 395 aaKnown RBP13.82□□□□□ -0.2
CXCL12-201ENST00000343575 KCNC4Q03721 635 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 NDUFA9Q16795 377 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 SYT16Q17RD7 645 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 C16orf87Q6PH81 154 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 METTL27Q8N6F8 245 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-201ENST00000343575 NRBF2Q96F24 287 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 COG8Q96MW5 612 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 PCDHAC1Q9H158 963 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 GLIPR2Q9H4G4 154 aa13.82□□□□□ -0.2
CXCL12-201ENST00000343575 SIRT3Q9NTG7 399 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-201ENST00000343575 NCDNQ9UBB6 729 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms