RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 IGLV3-21P80748 117 aaPredicted RBP12.29□□□□□ -0.44
TUBD1-202ENST00000340993 NADK2Q4G0N4 442 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 TRMT12Q53H54 448 aaKnown RBP12.29□□□□□ -0.44
TUBD1-202ENST00000340993 TMEM107Q6UX40 140 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 CATSPER1Q8NEC5 780 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.29□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF721Q8TF20 911 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 VMP1Q96GC9 406 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 FCRL1Q96LA6 429 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 SLC25A18Q9H1K4 315 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 RABEP2Q9H5N1 569 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 REEP4Q9H6H4 257 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 MMP25Q9NPA2 562 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 SIRT5Q9NXA8 310 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 NOP53Q9NZM5 478 aaKnown RBP12.29□□□□□ -0.44
TUBD1-202ENST00000340993 NBASA2RRP1 2371 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 A0A0G2JND7 137 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 EIF4E1BA6NMX2 242 aaKnown RBP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 PCDH17O14917 1159 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 POLR3GO15318 223 aaPredicted RBP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 PDPK1O15530 556 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 CEACAM4O75871 244 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ABCB1P08183 1280 aaPredicted RBP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 LAMP1P11279 417 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ICAM2P13598 275 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 CSNK2A2P19784 350 aaPredicted RBP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 NTSP30990 170 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ARG2P78540 354 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 EMX2Q04743 252 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 LSM12Q3MHD2 195 aaKnown RBP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ABHD17BQ5VST6 288 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ISLR2Q6UXK2 745 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 TMEM64Q6YI46 380 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 HSDL2Q6YN16 418 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 LARP4Q71RC2 724 aaKnown RBP eCLIP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 WDR53Q7Z5U6 358 aaPredicted RBP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 C9orf40Q8IXQ3 194 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 OR1N1Q8NGS0 311 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ELP5Q8TE02 316 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF681Q96N22 645 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 FAM107BQ9H098 131 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 GLIPR2Q9H4G4 154 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 CXorf21Q9HAI6 301 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 STMN3Q9NZ72 180 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 A0A1W2PQ72 361 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 GABRR3A8MPY1 467 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 SCAMP2O15127 329 aaKnown RBP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ATXN7O15265 892 aaPredicted RBP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 WDPCPO95876 746 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ALPPP05187 535 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 GPC1P35052 558 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 MC3RP41968 323 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 IDH3AP50213 366 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 UFM1P61960 85 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 OC90Q02509 493 aaPredicted RBP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 MPEG1Q2M385 716 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ACER2Q5QJU3 275 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF468Q5VIY5 522 aaPredicted RBP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 RNF111Q6ZNA4 994 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 IKBIPQ70UQ0 350 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 ANKRD46Q86W74 232 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 VWA5B2Q8N398 1253 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 OR52R1Q8NGF1 315 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 SUN3Q8TAQ9 357 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 FBXO30Q8TB52 745 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 TEX37Q96LM6 180 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 DPY30Q9C005 99 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.28□□□□□ -0.44
TUBD1-202ENST00000340993 EQTNQ9NQ60 294 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 MAT2BQ9NZL9 334 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 MAP10Q9P2G4 905 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 DTX4Q9Y2E6 619 aa12.28□□□□□ -0.44
TUBD1-202ENST00000340993 NPIPB8E9PQR5 432 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 SLCO1B7G3V0H7 640 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 EDF1O60869 148 aaKnown RBP12.27□□□□□ -0.45
TUBD1-202ENST00000340993 ABCB7O75027 752 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 OR2J2O76002 312 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 PRPS2P11908 318 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 ASMTP46597 345 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 GPR143P51810 404 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 MAD2L1Q13257 205 aaPredicted RBP12.27□□□□□ -0.45
TUBD1-202ENST00000340993 RPS6KA2Q15349 733 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 PRICKLE4Q2TBC4 344 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 SOWAHCQ53LP3 525 aaPredicted RBP12.27□□□□□ -0.45
TUBD1-202ENST00000340993 CPTPQ5TA50 214 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 EPGNQ6UW88 154 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 ACAD11Q709F0 780 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 RPS19BP1Q86WX3 136 aaKnown RBP12.27□□□□□ -0.45
TUBD1-202ENST00000340993 LRRC34Q8IZ02 419 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 PRR22Q8IZ63 422 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 FAM9CQ8IZT9 166 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 KIRREL3Q8IZU9 778 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 SLC5A8Q8N695 610 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 MORN4Q8NDC4 146 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 OR7G2Q8NG99 324 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 OR5M3Q8NGP4 307 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 OR9I1Q8NGQ6 314 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 OTUB1Q96FW1 271 aaPredicted RBP12.27□□□□□ -0.45
TUBD1-202ENST00000340993 FBXL20Q96IG2 436 aa12.27□□□□□ -0.45
TUBD1-202ENST00000340993 HES7Q9BYE0 225 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms