RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 FGF4P08620 206 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 IL3P08700 152 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 CT62P0C5K7 136 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 CD46P15529 392 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 NME2P22392 152 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 SSR4P51571 173 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 SLC37A1P57057 533 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 SRSF11Q05519 484 aaKnown RBP14.26□□□□□ -0.13
VAPA-201ENST00000340541 BTKQ06187 659 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 ASPHQ12797 758 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 MPP2Q14168 576 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 ZNF267Q14586 743 aaPredicted RBP14.26□□□□□ -0.13
VAPA-201ENST00000340541 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.26□□□□□ -0.13
VAPA-201ENST00000340541 UGT3A2Q3SY77 523 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 CES4AQ5XG92 561 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 SLC25A25Q6KCM7 469 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 RNF165Q6ZSG1 346 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 GALNTL5Q7Z4T8 443 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 HORMAD2Q8N7B1 307 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 OR2T11Q8NH01 316 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 NUBPLQ8TB37 319 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.26□□□□□ -0.131e-63■■□□□ 14.1
VAPA-201ENST00000340541 C16orf78Q8WTQ4 265 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 NR4A3Q92570 626 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 CNRIP1Q96F85 164 aaPredicted RBP14.26□□□□□ -0.13
VAPA-201ENST00000340541 ART5Q96L15 291 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 ZNF681Q96N22 645 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 RASL10BQ96S79 203 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 EBPLQ9BY08 206 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 RUBCNLQ9H714 662 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 COPS7AQ9UBW8 275 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 DLGAP4Q9Y2H0 992 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 DNAJC15Q9Y5T4 150 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 LRBAP50851 2863 aa14.26□□□□□ -0.13
VAPA-201ENST00000340541 GNG14A0A1W2PPG7 69 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 ASPDHA6ND91 283 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 TMEM233B4DJY2 109 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 CTIFO43310 598 aaKnown RBP14.25□□□□□ -0.13
VAPA-201ENST00000340541 CRCPO75575 148 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 WISP2O76076 250 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 OR6B1O95007 311 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 CRYABP02511 175 aaKnown RBP14.25□□□□□ -0.13
VAPA-201ENST00000340541 DHRS4L1P0CG22 281 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 S1PR1P21453 382 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 PRPH2P23942 346 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 MST1P26927 711 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 SOX3P41225 446 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 SERPINB4P48594 390 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 MGAT2Q10469 447 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 FUT7Q11130 342 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 KIAA0040Q15053 153 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 SPDYAQ5MJ70 313 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 SP5Q6BEB4 398 aaPredicted RBP14.25□□□□□ -0.13
VAPA-201ENST00000340541 FAM180BQ6P0A1 224 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 Q6ZSR9 355 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 MDGA2Q7Z553 956 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 GALNT12Q8IXK2 581 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 TMEM156Q8N614 296 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 TMEM178AQ8NBL3 297 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 OR5L2Q8NGL0 311 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 FRMD6Q96NE9 622 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 FAIM2Q9BWQ8 316 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 ACTL7BQ9Y614 415 aa14.25□□□□□ -0.13
VAPA-201ENST00000340541 DYRK3O43781 588 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 ERAL1O75616 437 aaKnown RBP14.24□□□□□ -0.13
VAPA-201ENST00000340541 NADKO95544 446 aaPredicted RBP14.24□□□□□ -0.13
VAPA-201ENST00000340541 ATP1B1P05026 303 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 ANXA4P09525 319 aaPredicted RBP14.24□□□□□ -0.13
VAPA-201ENST00000340541 DRD2P14416 443 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 PORP16435 677 aaPredicted RBP14.24□□□□□ -0.13
VAPA-201ENST00000340541 CSNK2A2P19784 350 aaPredicted RBP14.24□□□□□ -0.13
VAPA-201ENST00000340541 SSTR4P31391 388 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 PTGER1P34995 402 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 SERPINB5P36952 375 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 FEN1P39748 380 aaKnown RBP14.24□□□□□ -0.13
VAPA-201ENST00000340541 ALDH9A1P49189 494 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 EBPQ15125 230 aaKnown RBP14.24□□□□□ -0.13
VAPA-201ENST00000340541 IMPG1Q17R60 797 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 MPEG1Q2M385 716 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 PRICKLE4Q2TBC4 344 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 PIGGQ5H8A4 983 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 MTFR2Q6P444 385 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 LYPD8Q6UX82 237 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 RNF111Q6ZNA4 994 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 CROCCP2Q86T23 111 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 CYP4Z2PQ8N1L4 340 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 ZNF615Q8N8J6 731 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 FAM76AQ8TAV0 307 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 KLHL29Q96CT2 875 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 PKNOX2Q96KN3 472 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 CENPHQ9H3R5 247 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 RRAGDQ9NQL2 400 aaPredicted RBP14.24□□□□□ -0.13
VAPA-201ENST00000340541 EXO1Q9UQ84 846 aaKnown RBP14.24□□□□□ -0.13
VAPA-201ENST00000340541 FIS1Q9Y3D6 152 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 TRAF6Q9Y4K3 522 aa14.24□□□□□ -0.13
VAPA-201ENST00000340541 POLR3HQ9Y535 204 aaPredicted RBP14.24□□□□□ -0.13
VAPA-201ENST00000340541 EML6Q6ZMW3 1958 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 GOLGA6L10A6NI86 522 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 ZG16O60844 167 aa14.23□□□□□ -0.13
VAPA-201ENST00000340541 ERLIN1O75477 346 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms